Reviewed,
UniProtKB/Swiss-Prot P16530 (PELX_ERWCA)
Last modified
April 14, 2009.
Version 55.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Putative pectate lyase X EC=4.2.2.2 | ||
| Gene names |
| ||
| Organism | Erwinia carotovora | ||
| Taxonomic identifier | 554 [NCBI] | ||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium |
Protein attributes
| Sequence length | 238 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | Involved in maceration and soft-rotting of plant tissue. |
| Catalytic activity | Eliminative cleavage of (1->4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends. |
| Cofactor | Binds 1 calcium ion per subunit By similarity. |
| Pathway | Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconic acid from pectin: step 2/5. |
| Induction | By pectin. |
| Sequence similarities | Belongs to the polysaccharide lyase 1 family. |
Ontologies
| Keywords | |
|---|---|
| Domain | Signal |
| Ligand | Calcium Metal-binding |
| Molecular function | Lyase |
| Gene Ontology (GO) | |
| Molecular function | calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW pectate lyase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
| ||||||||||||||||||
References
| [1] | "DNA structure of pectate lyase I gene cloned from Erwinia carotovora." Ito K., Kobayashi R., Nikaido N., Izaki K. Agric. Biol. Chem. 52:479-487(1988) Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: Er 18. |
Cross-references
Sequence databases | |
|---|---|
| D00218 Genomic DNA. Translation: BAA00156.1. | |
3D structure databases | |
| HSSP | HSSP built from PDB template 1AIR based on UniProtKB P11073. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | PL1. Polysaccharide Lyase Family 1. |
Enzyme and pathway databases | |
| BRENDA | 4.2.2.2. 1498. |
Family and domain databases | |
| InterPro | IPR002022. Amb_allergen. IPR012334. Pectin_lyas_fold. [Graphical view] |
| Gene3D | G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit. |
| Pfam | PF00544. Pec_lyase_C. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | PELX_ERWCA | ||||||||
| Accession | Primary (citable) accession number: P16530 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


