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P16450 (GERD_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Spore germination protein GerD
Gene names
Name:gerD
Ordered Locus Names:BSU01550
OrganismBacillus subtilis (strain 168) [Reference proteome] [HAMAP]
Taxonomic identifier224308 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus ›

Protein attributes

Sequence length185 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

May be involved in fructose recognition during germination.

Subcellular location

Cell membrane; Lipid-anchor Probable.

Developmental stage

Active between T2 and T6 of sporulation.

Ontologies

Keywords
   Biological processGermination
   Cellular componentCell membrane
Membrane
   DomainSignal
   PTMLipoprotein
Palmitate
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentplasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential
Chain20 – 185166Spore germination protein GerD
PRO_0000018177

Amino acid modifications

Lipidation201N-palmitoyl cysteine Probable
Lipidation201S-diacylglycerol cysteine Probable

Sequences

Sequence LengthMass (Da)Tools
P16450 [UniParc].

Last modified August 1, 1990. Version 1.
Checksum: 4F37211BDF61B340

FASTA18521,117
        10         20         30         40         50         60 
MSKAKTLLMS CFLLLSVTAC APKDQAADMD YDQTKKMVVD ILKTDDGKKA IKELLNDDAM 

        70         80         90        100        110        120 
NEALVIDQDA IKGTIEKTLT SKKGEEFWKN IFEDTDFAEG FAKTLQTEHE KVIKKLMKDP 

       130        140        150        160        170        180 
DYQKMLMSVM QDPGMDKKYS QLAKSQEFRS YLEEVINETL SSPLYKKQFE DELKKAAKDT 


AKESE

« Hide

References

« Hide 'large scale' references
[1]"Cloning and sequencing of the gerD gene of Bacillus subtilis."
Yon J.R., Sammons R.L., Smith D.A.
J. Gen. Microbiol. 135:3431-3445(1989) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[2]"Sequence analysis of a 50 kb region between spo0H and rrnH on the Bacillus subtilis chromosome."
Yasumoto K., Liu H., Jeong S.M., Ohashi Y., Kakinuma S., Tanaka K., Kawamura F., Yoshikawa H., Takahashi H.
Microbiology 142:3039-3046(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[3]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.
[4]"Identification of a membrane protein involved in activation of the KinB pathway to sporulation in Bacillus subtilis."
Dartois V., Djavakhishvili T., Hoch J.A.
J. Bacteriol. 178:1178-1186(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-84.
Strain: 168 / JH642.
[5]"Nucleotide sequence and regulation of a new putative cell wall hydrolase gene, cwlD, which affects germination in Bacillus subtilis."
Sekiguchi J., Akeo K., Yamamoto H., Khasanov F.K., Alonso J.C., Kuroda A.
J. Bacteriol. 177:5582-5589(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 147-185.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		M27259 Genomic DNA. Translation: AAA22470.1.
D64126 Genomic DNA. Translation: BAA10995.1.
AL009126 Genomic DNA. Translation: CAB11931.1.
U23797 Genomic DNA. Translation: AAC43999.1.
X74737 Genomic DNA. Translation: CAA52757.1.
PIRA37207.
RefSeqNP_388036.1. NC_000964.3.

3D structure databases

ProteinModelPortalP16450.
ModBaseSearch...

Protein-protein interaction databases

STRING224308.BSU01550.

Proteomic databases

PaxDbP16450.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB11931; CAB11931; BSU01550.
GeneID938910.
KEGGbsu:BSU01550.
PATRIC18971821. VBIBacSub10457_0159.

Organism-specific databases

GenoListBSU01550. [Micado]

Phylogenomic databases

eggNOGNOG13463.
HOGENOMHOG000082126.
KOK06294.
OMAMKDPEYQ.
ProtClustDBCLSK872652.

Enzyme and pathway databases

BioCycBSUB:BSU01550-MONOMER.

Family and domain databases

PROSITEPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGERD_BACSU
AccessionPrimary (citable) accession number: P16450
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: August 1, 1990
Last modified: May 1, 2013
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents