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Protein

Pupal cuticle protein

Gene

Pcp

Organism
Drosophila pseudoobscura pseudoobscura (Fruit fly)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Component of the cuticle of the pupa of fruit fly.

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Pupal cuticle protein
Gene namesi
Name:Pcp
ORF Names:GA17453
OrganismiDrosophila pseudoobscura pseudoobscura (Fruit fly)
Taxonomic identifieri46245 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000001819 Componenti: Partially assembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0012707. Dpse\Pcp.

Subcellular locationi

Keywords - Cellular componenti

Cuticle

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1515Sequence analysisAdd
BLAST
Chaini16 – 192177Pupal cuticle proteinPRO_0000006398Add
BLAST

Expressioni

Developmental stagei

Expressed throughout both the fourth and the fifth larval instars.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini45 – 10662Chitin-binding type R&RPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 chitin-binding type R&R domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

InParanoidiP16369.

Family and domain databases

InterProiIPR031311. CHIT_BIND_RR_consensus.
IPR000618. Insect_cuticle.
[Graphical view]
PfamiPF00379. Chitin_bind_4. 1 hit.
[Graphical view]
PRINTSiPR00947. CUTICLE.
PROSITEiPS00233. CHIT_BIND_RR_1. 1 hit.
PS51155. CHIT_BIND_RR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P16369-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHLLMSLFGV LAVMQQQLAV RAAAYIPDSD RNTKTLQNDL QVERDGNYRY
60 70 80 90 100
AYETSNGISA TQEGLGGVSV QGGSSYTSPE GSVISVSYVA DETGYHPVGD
110 120 130 140 150
HIPKVPDYIL RALEYIRAHP YQVKDYYTGE LKTVAHDAAA FNVYTRNIQD
160 170 180 190
QTTPRSRPSS TPKTIYLTHP PTLSDAPTRR PLRQRQNDSR RR
Length:192
Mass (Da):21,476
Last modified:June 27, 2006 - v2
Checksum:iE68A4EB934FF8FA9
GO

Sequence cautioni

The sequence EAL34462 differs from that shown. Reason: Erroneous gene model prediction. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti20 – 201V → F in CAA29610 (PubMed:3123310).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X06285 Genomic DNA. Translation: CAA29610.1.
CH379058 Genomic DNA. Translation: EAL34462.2. Sequence problems.
PIRiS01205. UCFFPP.
RefSeqiXP_001357393.3. XM_001357357.3.
XP_015035470.1. XM_015179984.1.

Genome annotation databases

GeneIDi4817814.
KEGGidpo:Dpse_GA17453.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X06285 Genomic DNA. Translation: CAA29610.1.
CH379058 Genomic DNA. Translation: EAL34462.2. Sequence problems.
PIRiS01205. UCFFPP.
RefSeqiXP_001357393.3. XM_001357357.3.
XP_015035470.1. XM_015179984.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi4817814.
KEGGidpo:Dpse_GA17453.

Organism-specific databases

FlyBaseiFBgn0012707. Dpse\Pcp.

Phylogenomic databases

InParanoidiP16369.

Family and domain databases

InterProiIPR031311. CHIT_BIND_RR_consensus.
IPR000618. Insect_cuticle.
[Graphical view]
PfamiPF00379. Chitin_bind_4. 1 hit.
[Graphical view]
PRINTSiPR00947. CUTICLE.
PROSITEiPS00233. CHIT_BIND_RR_1. 1 hit.
PS51155. CHIT_BIND_RR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCUPP_DROPS
AccessioniPrimary (citable) accession number: P16369
Secondary accession number(s): Q29P32
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: June 27, 2006
Last modified: September 7, 2016
This is version 76 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.