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P15447

- GLB4_GLYDI

UniProt

P15447 - GLB4_GLYDI

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Protein

Globin, monomeric component M-IV

Gene
N/A
Organism
Glycera dibranchiata (Bloodworm)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi91 – 911Iron (heme axial ligand)

GO - Molecular functioni

  1. heme binding Source: InterPro
  2. iron ion binding Source: InterPro
  3. oxygen binding Source: InterPro
  4. oxygen transporter activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Oxygen transport, Transport

Keywords - Ligandi

Heme, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Globin, monomeric component M-IV
Alternative name(s):
GMH4
OrganismiGlycera dibranchiata (Bloodworm)
Taxonomic identifieri6350 [NCBI]
Taxonomic lineageiEukaryotaMetazoaLophotrochozoaAnnelidaPolychaetaPalpataAciculataPhyllodocidaGlyceridaeGlycera

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed2 Publications
Chaini2 – 148147Globin, monomeric component M-IVPRO_0000052502Add
BLAST

Interactioni

Subunit structurei

Monomer.1 Publication

Structurei

Secondary structure

1
148
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi5 – 1915
Turni20 – 245
Helixi25 – 3814
Helixi40 – 423
Helixi43 – 464
Beta strandi49 – 524
Helixi55 – 7218
Turni73 – 753
Helixi77 – 9014
Helixi91 – 933
Beta strandi94 – 974
Helixi101 – 1033
Helixi104 – 11916
Helixi120 – 1223
Helixi125 – 14622

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1JF4X-ray1.40A2-148[»]
1JL6X-ray1.40A2-148[»]
1VRENMR-A2-148[»]
1VRFNMR-A2-148[»]
ProteinModelPortaliP15447.
SMRiP15447. Positions 2-148.

Miscellaneous databases

EvolutionaryTraceiP15447.

Family & Domainsi

Sequence similaritiesi

Belongs to the globin family.

Family and domain databases

Gene3Di1.10.490.10. 1 hit.
InterProiIPR000971. Globin.
IPR009050. Globin-like.
IPR013316. Globin_annelid-type.
IPR012292. Globin_dom.
[Graphical view]
PfamiPF00042. Globin. 1 hit.
[Graphical view]
PRINTSiPR01907. WORMGLOBIN.
SUPFAMiSSF46458. SSF46458. 1 hit.
PROSITEiPS01033. GLOBIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P15447-1 [UniParc]FASTAAdd to Basket

« Hide

MGLSAAQRQV VASTWKDIAG SDNGAGVGKE CFTKFLSAHH DIAAVFGFSG    50
ASDPGVADLG AKVLAQIGVA VSHLGDEGKM VAEMKAVGVR HKGYGYKHIK 100
AEYFEPLGAS LLSAMEHRIG GKMTAAAKDA WAAAYADISG ALISGLQS 148
Length:148
Mass (Da):15,178
Last modified:January 23, 2007 - v2
Checksum:i9206F7FBE1CAB7F1
GO

Mass spectrometryi

Molecular mass is 15031.6±3.8 Da from positions 2 - 148. Determined by ESI. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
J02873 mRNA. Translation: AAA29162.1.
PIRiA33420.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
J02873 mRNA. Translation: AAA29162.1 .
PIRi A33420.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1JF4 X-ray 1.40 A 2-148 [» ]
1JL6 X-ray 1.40 A 2-148 [» ]
1VRE NMR - A 2-148 [» ]
1VRF NMR - A 2-148 [» ]
ProteinModelPortali P15447.
SMRi P15447. Positions 2-148.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei P15447.

Family and domain databases

Gene3Di 1.10.490.10. 1 hit.
InterProi IPR000971. Globin.
IPR009050. Globin-like.
IPR013316. Globin_annelid-type.
IPR012292. Globin_dom.
[Graphical view ]
Pfami PF00042. Globin. 1 hit.
[Graphical view ]
PRINTSi PR01907. WORMGLOBIN.
SUPFAMi SSF46458. SSF46458. 1 hit.
PROSITEi PS01033. GLOBIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "cDNA cloning and predicted amino acid sequence of Glycera dibranchiata monomer hemoglobin IV."
    Simons P.C., Satterlee J.D.
    Biochemistry 28:8525-8530(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 2-25.
  2. "Complete amino acid sequence of the Glycera dibranchiata monomer hemoglobin component IV: structural implications."
    Alam S.L., Satterlee J.D., Edmonds C.G.
    J. Protein Chem. 13:151-164(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-148, MASS SPECTROMETRY, 3D-STRUCTURE MODELING.
    Tissue: Erythrocyte.
  3. "Solution structure and backbone dynamics of component IV Glycera dibranchiata monomeric hemoglobin-CO."
    Volkman B.F., Alam S.L., Satterlee J.D., Markley J.L.
    Biochemistry 37:10906-10919(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR.
  4. "Crystal structures of unligated and CN-ligated Glycera dibranchiata monomer ferric hemoglobin components III and IV."
    Park H.J., Yang C., Treff N., Satterlee J.D., Kang C.
    Proteins 49:49-60(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.4 ANGSTROMS)IN COMPLEX WITH HEME, SUBUNIT.

Entry informationi

Entry nameiGLB4_GLYDI
AccessioniPrimary (citable) accession number: P15447
Secondary accession number(s): P81779
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 1, 1990
Last sequence update: January 23, 2007
Last modified: July 9, 2014
This is version 85 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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