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P15447 (GLB4_GLYDI) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 85. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Globin, monomeric component M-IV
Alternative name(s):
GMH4
OrganismGlycera dibranchiata (Bloodworm)
Taxonomic identifier6350 [NCBI]
Taxonomic lineageEukaryotaMetazoaLophotrochozoaAnnelidaPolychaetaPalpataAciculataPhyllodocidaGlyceridaeGlycera

Protein attributes

Sequence length148 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Subunit structure

Monomer. Ref.4

Sequence similarities

Belongs to the globin family.

Mass spectrometry

Molecular mass is 15031.6±3.8 Da from positions 2 - 148. Determined by ESI. Ref.2

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Ref.1 Ref.2
Chain2 – 148147Globin, monomeric component M-IV
PRO_0000052502

Sites

Metal binding911Iron (heme axial ligand)

Secondary structure

....................... 148
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P15447 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 9206F7FBE1CAB7F1

FASTA14815,178
        10         20         30         40         50         60 
MGLSAAQRQV VASTWKDIAG SDNGAGVGKE CFTKFLSAHH DIAAVFGFSG ASDPGVADLG 

        70         80         90        100        110        120 
AKVLAQIGVA VSHLGDEGKM VAEMKAVGVR HKGYGYKHIK AEYFEPLGAS LLSAMEHRIG 

       130        140 
GKMTAAAKDA WAAAYADISG ALISGLQS 

« Hide

References

[1]"cDNA cloning and predicted amino acid sequence of Glycera dibranchiata monomer hemoglobin IV."
Simons P.C., Satterlee J.D.
Biochemistry 28:8525-8530(1989) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 2-25.
[2]"Complete amino acid sequence of the Glycera dibranchiata monomer hemoglobin component IV: structural implications."
Alam S.L., Satterlee J.D., Edmonds C.G.
J. Protein Chem. 13:151-164(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE OF 2-148, MASS SPECTROMETRY, 3D-STRUCTURE MODELING.
Tissue: Erythrocyte.
[3]"Solution structure and backbone dynamics of component IV Glycera dibranchiata monomeric hemoglobin-CO."
Volkman B.F., Alam S.L., Satterlee J.D., Markley J.L.
Biochemistry 37:10906-10919(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY NMR.
[4]"Crystal structures of unligated and CN-ligated Glycera dibranchiata monomer ferric hemoglobin components III and IV."
Park H.J., Yang C., Treff N., Satterlee J.D., Kang C.
Proteins 49:49-60(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.4 ANGSTROMS)IN COMPLEX WITH HEME, SUBUNIT.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
J02873 mRNA. Translation: AAA29162.1.
PIRA33420.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1JF4X-ray1.40A2-148[»]
1JL6X-ray1.40A2-148[»]
1VRENMR-A2-148[»]
1VRFNMR-A2-148[»]
ProteinModelPortalP15447.
SMRP15447. Positions 2-148.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D1.10.490.10. 1 hit.
InterProIPR000971. Globin.
IPR009050. Globin-like.
IPR013316. Globin_annelid-type.
IPR012292. Globin_dom.
[Graphical view]
PfamPF00042. Globin. 1 hit.
[Graphical view]
PRINTSPR01907. WORMGLOBIN.
SUPFAMSSF46458. SSF46458. 1 hit.
PROSITEPS01033. GLOBIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP15447.

Entry information

Entry nameGLB4_GLYDI
AccessionPrimary (citable) accession number: P15447
Secondary accession number(s): P81779
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1990
Last sequence update: January 23, 2007
Last modified: July 9, 2014
This is version 85 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references