Reviewed,
UniProtKB/Swiss-Prot P15093 (DYR_HALVO)
Last modified
June 16, 2009.
Version 59.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Dihydrofolate reductase EC=1.5.1.3 | ||
| Gene names |
| ||
| Organism | Halobacterium volcanii (Haloferax volcanii) | ||
| Taxonomic identifier | 2246 [NCBI] | ||
| Taxonomic lineage | Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Haloferax |
Protein attributes
| Sequence length | 162 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Catalytic activity | 5,6,7,8-tetrahydrofolate + NADP+ = 7,8-dihydrofolate + NADPH. |
| Pathway | Cofactor biosynthesis; tetrahydrofolate biosynthesis; tetrahydrofolate from dihydrofolate: step 1/1. |
| Miscellaneous | The reaction catalyzed by this enzyme represents an essential step for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP. |
| Sequence similarities | Belongs to the dihydrofolate reductase family. Contains 1 DHFR (dihydrofolate reductase) domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | One-carbon metabolism |
| Ligand | NADP |
| Molecular function | Oxidoreductase |
| Technical term | 3D-structure |
| Gene Ontology (GO) | |
| Biological process | glycine biosynthetic process Inferred from electronic annotation. Source: InterPro nucleotide biosynthetic processInferred from electronic annotation. Source: InterPro one-carbon compound metabolic processInferred from electronic annotation. Source: UniProtKB-KW oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | NADP or NADPH binding Inferred from electronic annotation. Source: InterPro dihydrofolate reductase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 162 | 162 | Dihydrofolate reductase | PRO_0000186433 | ||||||||||||||||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||||||||||||||||
| Domain | 2 – 162 | 161 | DHFR | |||||||||||||||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 3 – 11 | 9 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 13 – 17 | 5 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 27 – 36 | 10 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 38 – 40 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 42 – 45 | 4 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 46 – 51 | 6 | ||||||||||||||||||||||||||||||||||||||||
| Turn | 52 – 54 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 58 – 64 | 7 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 73 – 75 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 78 – 81 | 4 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 82 – 91 | 10 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 97 – 101 | 5 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 103 – 109 | 7 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 110 – 112 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 114 – 124 | 11 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 128 – 130 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Turn | 136 – 138 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 139 – 146 | 8 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 151 – 157 | 7 | ||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| [1] | "Dihydrofolate reductase of the extremely halophilic archaebacterium Halobacterium volcanii. The enzyme and its coding gene." Zusman T., Rosenshine I., Boehm G., Jaenicke R., Leskiw B., Mevarech M. J. Biol. Chem. 264:18878-18883(1989) [PubMed: 2509470] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "Structural features of halophilicity derived from the crystal structure of dihydrofolate reductase from the Dead Sea halophilic archaeon, Haloferax volcanii." Pieper U., Kapadia G., Mevarech M., Herzberg O. Structure 6:75-88(1998) [PubMed: 9493269] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.55 ANGSTROMS). |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| J05088 Genomic DNA. Translation: AAA72219.1. | |||||||||||||||||||||||||
| PIR | A34429. | ||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||
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| ModBase | Search... | ||||||||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||||||||
| BRENDA | 1.5.1.3. 430. | ||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||
| InterPro | IPR012259. DHFR. IPR001796. DHFR_reg. IPR017925. Dihydrofolate_reductase_CS. [Graphical view] | ||||||||||||||||||||||||
| PANTHER | PTHR11549:SF1. DHFR. 1 hit. | ||||||||||||||||||||||||
| Pfam | PF00186. DHFR_1. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| PRINTS | PR00070. DHFR. | ||||||||||||||||||||||||
| PROSITE | PS00075. DHFR_1. 1 hit. PS51330. DHFR_2. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||
Entry information
| Entry name | DYR_HALVO | ||||||||
| Accession | Primary (citable) accession number: P15093 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with


