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Protein

40S ribosomal protein S16

Gene

Rps16

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-MMU-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-MMU-72649. Translation initiation complex formation.
R-MMU-72689. Formation of a pool of free 40S subunits.
R-MMU-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-MMU-72702. Ribosomal scanning and start codon recognition.
R-MMU-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-MMU-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-MMU-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S16
Gene namesi
Name:Rps16
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:98118. Rps16.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001114801 – 14640S ribosomal protein S16Add BLAST146

Proteomic databases

EPDiP14131.
MaxQBiP14131.
PaxDbiP14131.
PRIDEiP14131.

PTM databases

iPTMnetiP14131.
PhosphoSitePlusiP14131.

Expressioni

Gene expression databases

BgeeiENSMUSG00000037563.
CleanExiMM_RPS16.
ExpressionAtlasiP14131. baseline and differential.
GenevisibleiP14131. MM.

Interactioni

Protein-protein interaction databases

BioGridi203004. 3 interactors.
IntActiP14131. 7 interactors.
MINTiMINT-1856568.
STRINGi10090.ENSMUSP00000103940.

Structurei

3D structure databases

ProteinModelPortaliP14131.
SMRiP14131.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1753. Eukaryota.
COG0103. LUCA.
GeneTreeiENSGT00390000013067.
HOVERGENiHBG055171.
InParanoidiP14131.
KOiK02960.
OMAiHVSQIYA.
OrthoDBiEOG091G0QRW.
TreeFamiTF300088.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
InterProiView protein in InterPro
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR000754. Ribosomal_S9.
IPR020574. Ribosomal_S9_CS.
PANTHERiPTHR21569. PTHR21569. 1 hit.
PfamiView protein in Pfam
PF00380. Ribosomal_S9. 1 hit.
SUPFAMiSSF54211. SSF54211. 1 hit.
PROSITEiView protein in PROSITE
PS00360. RIBOSOMAL_S9. 1 hit.

Sequencei

Sequence statusi: Complete.

P14131-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSKGPLQSV QVFGRKKTAT AVAHCKRGNG LIKVNGRPLE MIEPRTLQYK
60 70 80 90 100
LLEPVLLLGK ERFAGVDIRV RVKGGGHVAQ IYAIRQSISK ALVAYYQKYV
110 120 130 140
DEASKKEIKD ILIQYDRTLL VADPRRCESK KFGGPGARAR YQKSYR
Length:146
Mass (Da):16,445
Last modified:January 23, 2007 - v4
Checksum:i519BCFB91BB68A15
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti19 – 20AT → L in AAA03646 (PubMed:3915781).Curated2
Sequence conflicti46T → A in AAA03646 (PubMed:3915781).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M11408 Unassigned DNA. Translation: AAA03646.1.
AK010613 mRNA. Translation: BAB27062.1.
AK010641 mRNA. Translation: BAB27083.1.
AK011060 mRNA. Translation: BAB27368.1.
AK019400 mRNA. Translation: BAB31702.1.
AK083946 mRNA. Translation: BAC39077.1.
AK088413 mRNA. Translation: BAC40341.1.
AK088716 mRNA. Translation: BAC40524.1.
AK150808 mRNA. Translation: BAE29871.1.
AK168207 mRNA. Translation: BAE40167.1.
AK169328 mRNA. Translation: BAE41081.1.
CCDSiCCDS39858.1.
PIRiS11623. R3MS16.
RefSeqiNP_038675.2. NM_013647.2.
UniGeneiMm.702.

Genome annotation databases

EnsembliENSMUST00000082134; ENSMUSP00000103940; ENSMUSG00000037563.
GeneIDi20055.
KEGGimmu:20055.
UCSCiuc012fgr.1. mouse.

Similar proteinsi

Entry informationi

Entry nameiRS16_MOUSE
AccessioniPrimary (citable) accession number: P14131
Secondary accession number(s): Q3THM9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 1, 1990
Last sequence update: January 23, 2007
Last modified: September 27, 2017
This is version 142 of the entry and version 4 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families