Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

40S ribosomal protein S17-B

Gene

RPS17B

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: SGD

GO - Biological processi

  • cytoplasmic translation Source: SGD
  • ribosomal small subunit assembly Source: SGD
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciYEAST:G3O-29978-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S17-B
Alternative name(s):
RP51B
Gene namesi
Name:RPS17B
Synonyms:RP51B
Ordered Locus Names:YDR447C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome IV

Organism-specific databases

EuPathDBiFungiDB:YDR447C.
SGDiS000002855. RPS17B.

Subcellular locationi

GO - Cellular componenti

  • cytosolic small ribosomal subunit Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001415471 – 13640S ribosomal protein S17-BAdd BLAST136

Proteomic databases

MaxQBiP14127.
PRIDEiP14127.

PTM databases

iPTMnetiP14127.

Interactioni

Subunit structurei

Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains 32 different proteins (encoded by 56 genes) and 1 molecule of RNA (18S). The 60S subunit contains 46 different proteins (encoded by 81 genes) and 3 molecules of RNA (25S, 5.8S and 5S).1 Publication

Protein-protein interaction databases

BioGridi32502. 86 interactors.
IntActiP14127. 62 interactors.
MINTiMINT-4482711.

Structurei

3D structure databases

ProteinModelPortaliP14127.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S17e family.Curated

Phylogenomic databases

HOGENOMiHOG000227166.
InParanoidiP14127.
KOiK02962.
OMAiYTTHLMR.

Family and domain databases

Gene3Di1.10.60.20. 1 hit.
HAMAPiMF_00511. Ribosomal_S17e. 1 hit.
InterProiIPR001210. Ribosomal_S17e.
IPR018273. Ribosomal_S17e_CS.
[Graphical view]
PANTHERiPTHR10732. PTHR10732. 1 hit.
PfamiPF00833. Ribosomal_S17e. 1 hit.
[Graphical view]
SUPFAMiSSF116820. SSF116820. 1 hit.
PROSITEiPS00712. RIBOSOMAL_S17E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P14127-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRVRTKTVK RASKALIERY YPKLTLDFQT NKRLCDEIAT IQSKRLRNKI
60 70 80 90 100
AGYTTHLMKR IQKGPVRGIS FKLQEEERER KDQYVPEVSA LDLSRSNGVL
110 120 130
NVDNQTSDLV KSLGLKLPLS VINVSAQRDR RYRKRN
Length:136
Mass (Da):15,803
Last modified:January 1, 1990 - v1
Checksum:i83EE5382870EA289
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02480 Genomic DNA. Translation: AAA34991.1.
U33007 Genomic DNA. Translation: AAB64890.1.
BK006938 Genomic DNA. Translation: DAA12282.1.
PIRiS20161. R4BY7B.
RefSeqiNP_010735.3. NM_001180755.3.

Genome annotation databases

EnsemblFungiiYDR447C; YDR447C; YDR447C.
GeneIDi852058.
KEGGisce:YDR447C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02480 Genomic DNA. Translation: AAA34991.1.
U33007 Genomic DNA. Translation: AAB64890.1.
BK006938 Genomic DNA. Translation: DAA12282.1.
PIRiS20161. R4BY7B.
RefSeqiNP_010735.3. NM_001180755.3.

3D structure databases

ProteinModelPortaliP14127.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi32502. 86 interactors.
IntActiP14127. 62 interactors.
MINTiMINT-4482711.

PTM databases

iPTMnetiP14127.

Proteomic databases

MaxQBiP14127.
PRIDEiP14127.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYDR447C; YDR447C; YDR447C.
GeneIDi852058.
KEGGisce:YDR447C.

Organism-specific databases

EuPathDBiFungiDB:YDR447C.
SGDiS000002855. RPS17B.

Phylogenomic databases

HOGENOMiHOG000227166.
InParanoidiP14127.
KOiK02962.
OMAiYTTHLMR.

Enzyme and pathway databases

BioCyciYEAST:G3O-29978-MONOMER.

Miscellaneous databases

PROiP14127.

Family and domain databases

Gene3Di1.10.60.20. 1 hit.
HAMAPiMF_00511. Ribosomal_S17e. 1 hit.
InterProiIPR001210. Ribosomal_S17e.
IPR018273. Ribosomal_S17e_CS.
[Graphical view]
PANTHERiPTHR10732. PTHR10732. 1 hit.
PfamiPF00833. Ribosomal_S17e. 1 hit.
[Graphical view]
SUPFAMiSSF116820. SSF116820. 1 hit.
PROSITEiPS00712. RIBOSOMAL_S17E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS17B_YEAST
AccessioniPrimary (citable) accession number: P14127
Secondary accession number(s): D6VT72
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 1, 1990
Last sequence update: January 1, 1990
Last modified: November 2, 2016
This is version 139 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 30500 molecules/cell in log phase SD medium.1 Publication
There are 2 genes for S17 in yeast.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome IV
    Yeast (Saccharomyces cerevisiae) chromosome IV: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.