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Protein

50S ribosomal protein L19e

Gene

rpl19e

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA. Located at the polypeptide exit tunnel on the outside of the subunit.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L19eUniRule annotation
Alternative name(s):
Hl24
Hmal19
Gene namesi
Name:rpl19eUniRule annotation
Ordered Locus Names:rrnAC1594
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001311872 – 14950S ribosomal protein L19eAdd BLAST148

Proteomic databases

PRIDEiP14119

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation3 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC1594

Structurei

Secondary structure

1149
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi5 – 14Combined sources10
Helixi19 – 21Combined sources3
Beta strandi22 – 24Combined sources3
Helixi26 – 28Combined sources3
Helixi29 – 34Combined sources6
Helixi38 – 46Combined sources9
Beta strandi49 – 52Combined sources4
Helixi61 – 71Combined sources11
Helixi78 – 80Combined sources3
Helixi85 – 88Combined sources4
Helixi91 – 111Combined sources21
Beta strandi112 – 115Combined sources4
Helixi117 – 127Combined sources11
Turni128 – 130Combined sources3
Helixi135 – 142Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40M2-149[»]
1JJ2X-ray2.40O2-149[»]
1K73X-ray3.01Q2-149[»]
1K8AX-ray3.00Q2-149[»]
1K9MX-ray3.00Q2-149[»]
1KC8X-ray3.01Q2-149[»]
1KD1X-ray3.00Q2-149[»]
1KQSX-ray3.10O2-149[»]
1M1KX-ray3.20Q2-149[»]
1M90X-ray2.80Q2-149[»]
1N8RX-ray3.00Q2-149[»]
1NJIX-ray3.00Q2-149[»]
1Q7YX-ray3.20Q2-149[»]
1Q81X-ray2.95Q2-149[»]
1Q82X-ray2.98Q2-149[»]
1Q86X-ray3.00Q2-149[»]
1QVFX-ray3.10O2-149[»]
1QVGX-ray2.90O2-149[»]
1S72X-ray2.40P1-149[»]
1VQ4X-ray2.70P1-149[»]
1VQ5X-ray2.60P1-149[»]
1VQ6X-ray2.70P1-149[»]
1VQ7X-ray2.50P1-149[»]
1VQ8X-ray2.20P1-149[»]
1VQ9X-ray2.40P1-149[»]
1VQKX-ray2.30P1-149[»]
1VQLX-ray2.30P1-149[»]
1VQMX-ray2.30P1-149[»]
1VQNX-ray2.40P1-149[»]
1VQOX-ray2.20P1-149[»]
1VQPX-ray2.25P1-149[»]
1W2BX-ray3.50O2-149[»]
1YHQX-ray2.40P1-149[»]
1YI2X-ray2.65P1-149[»]
1YIJX-ray2.60P1-149[»]
1YITX-ray2.80P1-149[»]
1YJ9X-ray2.90P1-149[»]
1YJNX-ray3.00P1-149[»]
1YJWX-ray2.90P1-149[»]
2OTJX-ray2.90P1-149[»]
2OTLX-ray2.70P1-149[»]
2QA4X-ray3.00P1-149[»]
2QEXX-ray2.90P1-149[»]
3CC2X-ray2.40P1-149[»]
3CC4X-ray2.70P1-149[»]
3CC7X-ray2.70P1-149[»]
3CCEX-ray2.75P1-149[»]
3CCJX-ray2.70P1-149[»]
3CCLX-ray2.90P1-149[»]
3CCMX-ray2.55P1-149[»]
3CCQX-ray2.90P1-149[»]
3CCRX-ray3.00P1-149[»]
3CCSX-ray2.95P1-149[»]
3CCUX-ray2.80P1-149[»]
3CCVX-ray2.90P1-149[»]
3CD6X-ray2.75P1-149[»]
3CMAX-ray2.80P1-149[»]
3CMEX-ray2.95P1-149[»]
3CPWX-ray2.70O1-149[»]
3CXCX-ray3.00O2-149[»]
3G4SX-ray3.20P2-144[»]
3G6EX-ray2.70P2-144[»]
3G71X-ray2.85P2-144[»]
3I55X-ray3.11P1-149[»]
3I56X-ray2.90P1-149[»]
3OW2X-ray2.70O2-144[»]
4ADXelectron microscopy6.60P1-149[»]
4V9FX-ray2.40P1-149[»]
ProteinModelPortaliP14119
SMRiP14119
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP14119

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL19 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04089 Archaea
COG2147 LUCA
HOGENOMiHOG000231276
KOiK02885
OMAiNRVWIDP
OrthoDBiPOG093Z0FV0

Family and domain databases

CDDicd01418 Ribosomal_L19e_A, 1 hit
Gene3Di1.10.1200.60, 1 hit
1.10.1650.10, 1 hit
1.20.5.560, 1 hit
HAMAPiMF_01475 Ribosomal_L19e, 1 hit
InterProiView protein in InterPro
IPR035970 60S_ribosomal_L19/L19e_sf
IPR000196 Ribosomal_L19/L19e
IPR023638 Ribosomal_L19/L19e_CS
IPR015972 Ribosomal_L19/L19e_dom1
IPR015973 Ribosomal_L19/L19e_dom2
IPR015974 Ribosomal_L19/L19e_dom3
IPR033936 Ribosomal_L19e_A
PfamiView protein in Pfam
PF01280 Ribosomal_L19e, 1 hit
SMARTiView protein in SMART
SM01416 Ribosomal_L19e, 1 hit
SUPFAMiSSF48140 SSF48140, 1 hit
PROSITEiView protein in PROSITE
PS00526 RIBOSOMAL_L19E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P14119-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDLSAQKRL AADVLDVGKN RVWFNPERQG DIADAITRED VRELVDEGAI
60 70 80 90 100
QAKDKKGNSR GRARERQKKR AYGHQKGAGS RKGKAGARQN SKEDWESRIR
110 120 130 140
AQRTKLRELR DEGTLSSSQY RDLYDKAGGG EFDSVADLER YIDANHGDA
Length:149
Mass (Da):16,762
Last modified:January 23, 2007 - v3
Checksum:i210F99E836B0B817
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti82K → G AA sequence (PubMed:2591382).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58395 Genomic DNA Translation: CAA41289.1
AY596297 Genomic DNA Translation: AAV46512.1
PIRiS16540 R5HSH4
RefSeqiWP_004516953.1, NC_006396.1

Genome annotation databases

EnsemblBacteriaiAAV46512; AAV46512; rrnAC1594
GeneIDi3127911
KEGGihma:rrnAC1594
PATRICifig|272569.17.peg.2283

Entry informationi

Entry nameiRL19E_HALMA
AccessioniPrimary (citable) accession number: P14119
Secondary accession number(s): Q5V1U0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 1, 1990
Last sequence update: January 23, 2007
Last modified: March 28, 2018
This is version 130 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

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