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Protein

50S ribosomal protein L19e

Gene

rpl19e

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA. Located at the polypeptide exit tunnel on the outside of the subunit.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L19eUniRule annotation
Alternative name(s):
Hl24
Hmal19
Gene namesi
Name:rpl19eUniRule annotation
Ordered Locus Names:rrnAC1594
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001311872 – 14950S ribosomal protein L19eAdd BLAST148

Proteomic databases

PRIDEiP14119.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation3 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC1594.

Structurei

Secondary structure

1149
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi5 – 14Combined sources10
Helixi19 – 21Combined sources3
Beta strandi22 – 24Combined sources3
Helixi26 – 28Combined sources3
Helixi29 – 34Combined sources6
Helixi38 – 46Combined sources9
Beta strandi49 – 52Combined sources4
Helixi61 – 71Combined sources11
Helixi78 – 80Combined sources3
Helixi85 – 88Combined sources4
Helixi91 – 111Combined sources21
Beta strandi112 – 115Combined sources4
Helixi117 – 127Combined sources11
Turni128 – 130Combined sources3
Helixi135 – 142Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40M2-149[»]
1JJ2X-ray2.40O2-149[»]
1K73X-ray3.01Q2-149[»]
1K8AX-ray3.00Q2-149[»]
1K9MX-ray3.00Q2-149[»]
1KC8X-ray3.01Q2-149[»]
1KD1X-ray3.00Q2-149[»]
1KQSX-ray3.10O2-149[»]
1M1KX-ray3.20Q2-149[»]
1M90X-ray2.80Q2-149[»]
1N8RX-ray3.00Q2-149[»]
1NJIX-ray3.00Q2-149[»]
1Q7YX-ray3.20Q2-149[»]
1Q81X-ray2.95Q2-149[»]
1Q82X-ray2.98Q2-149[»]
1Q86X-ray3.00Q2-149[»]
1QVFX-ray3.10O2-149[»]
1QVGX-ray2.90O2-149[»]
1S72X-ray2.40P1-149[»]
1VQ4X-ray2.70P1-149[»]
1VQ5X-ray2.60P1-149[»]
1VQ6X-ray2.70P1-149[»]
1VQ7X-ray2.50P1-149[»]
1VQ8X-ray2.20P1-149[»]
1VQ9X-ray2.40P1-149[»]
1VQKX-ray2.30P1-149[»]
1VQLX-ray2.30P1-149[»]
1VQMX-ray2.30P1-149[»]
1VQNX-ray2.40P1-149[»]
1VQOX-ray2.20P1-149[»]
1VQPX-ray2.25P1-149[»]
1W2BX-ray3.50O2-149[»]
1YHQX-ray2.40P1-149[»]
1YI2X-ray2.65P1-149[»]
1YIJX-ray2.60P1-149[»]
1YITX-ray2.80P1-149[»]
1YJ9X-ray2.90P1-149[»]
1YJNX-ray3.00P1-149[»]
1YJWX-ray2.90P1-149[»]
2OTJX-ray2.90P1-149[»]
2OTLX-ray2.70P1-149[»]
2QA4X-ray3.00P1-149[»]
2QEXX-ray2.90P1-149[»]
3CC2X-ray2.40P1-149[»]
3CC4X-ray2.70P1-149[»]
3CC7X-ray2.70P1-149[»]
3CCEX-ray2.75P1-149[»]
3CCJX-ray2.70P1-149[»]
3CCLX-ray2.90P1-149[»]
3CCMX-ray2.55P1-149[»]
3CCQX-ray2.90P1-149[»]
3CCRX-ray3.00P1-149[»]
3CCSX-ray2.95P1-149[»]
3CCUX-ray2.80P1-149[»]
3CCVX-ray2.90P1-149[»]
3CD6X-ray2.75P1-149[»]
3CMAX-ray2.80P1-149[»]
3CMEX-ray2.95P1-149[»]
3CPWX-ray2.70O1-149[»]
3CXCX-ray3.00O2-149[»]
3G4SX-ray3.20P2-144[»]
3G6EX-ray2.70P2-144[»]
3G71X-ray2.85P2-144[»]
3I55X-ray3.11P1-149[»]
3I56X-ray2.90P1-149[»]
3OW2X-ray2.70O2-144[»]
4ADXelectron microscopy6.60P1-149[»]
4V9FX-ray2.40P1-149[»]
ProteinModelPortaliP14119.
SMRiP14119.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP14119.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L19e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04089. Archaea.
COG2147. LUCA.
HOGENOMiHOG000231276.
KOiK02885.
OMAiNRVWIDP.

Family and domain databases

CDDicd01418. Ribosomal_L19e_A. 1 hit.
Gene3Di1.10.1200.60. 1 hit.
1.10.1650.10. 1 hit.
1.20.5.560. 1 hit.
HAMAPiMF_01475. Ribosomal_L19e. 1 hit.
InterProiIPR000196. Ribosomal_L19/L19e.
IPR023638. Ribosomal_L19/L19e_CS.
IPR015972. Ribosomal_L19/L19e_dom1.
IPR015973. Ribosomal_L19/L19e_dom2.
IPR015974. Ribosomal_L19/L19e_dom3.
IPR033936. Ribosomal_L19e_A.
[Graphical view]
PfamiPF01280. Ribosomal_L19e. 1 hit.
[Graphical view]
SMARTiSM01416. Ribosomal_L19e. 1 hit.
[Graphical view]
SUPFAMiSSF48140. SSF48140. 1 hit.
PROSITEiPS00526. RIBOSOMAL_L19E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P14119-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDLSAQKRL AADVLDVGKN RVWFNPERQG DIADAITRED VRELVDEGAI
60 70 80 90 100
QAKDKKGNSR GRARERQKKR AYGHQKGAGS RKGKAGARQN SKEDWESRIR
110 120 130 140
AQRTKLRELR DEGTLSSSQY RDLYDKAGGG EFDSVADLER YIDANHGDA
Length:149
Mass (Da):16,762
Last modified:January 23, 2007 - v3
Checksum:i210F99E836B0B817
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti82K → G AA sequence (PubMed:2591382).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58395 Genomic DNA. Translation: CAA41289.1.
AY596297 Genomic DNA. Translation: AAV46512.1.
PIRiS16540. R5HSH4.
RefSeqiWP_004516953.1. NC_006396.1.

Genome annotation databases

EnsemblBacteriaiAAV46512; AAV46512; rrnAC1594.
GeneIDi3127911.
KEGGihma:rrnAC1594.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58395 Genomic DNA. Translation: CAA41289.1.
AY596297 Genomic DNA. Translation: AAV46512.1.
PIRiS16540. R5HSH4.
RefSeqiWP_004516953.1. NC_006396.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40M2-149[»]
1JJ2X-ray2.40O2-149[»]
1K73X-ray3.01Q2-149[»]
1K8AX-ray3.00Q2-149[»]
1K9MX-ray3.00Q2-149[»]
1KC8X-ray3.01Q2-149[»]
1KD1X-ray3.00Q2-149[»]
1KQSX-ray3.10O2-149[»]
1M1KX-ray3.20Q2-149[»]
1M90X-ray2.80Q2-149[»]
1N8RX-ray3.00Q2-149[»]
1NJIX-ray3.00Q2-149[»]
1Q7YX-ray3.20Q2-149[»]
1Q81X-ray2.95Q2-149[»]
1Q82X-ray2.98Q2-149[»]
1Q86X-ray3.00Q2-149[»]
1QVFX-ray3.10O2-149[»]
1QVGX-ray2.90O2-149[»]
1S72X-ray2.40P1-149[»]
1VQ4X-ray2.70P1-149[»]
1VQ5X-ray2.60P1-149[»]
1VQ6X-ray2.70P1-149[»]
1VQ7X-ray2.50P1-149[»]
1VQ8X-ray2.20P1-149[»]
1VQ9X-ray2.40P1-149[»]
1VQKX-ray2.30P1-149[»]
1VQLX-ray2.30P1-149[»]
1VQMX-ray2.30P1-149[»]
1VQNX-ray2.40P1-149[»]
1VQOX-ray2.20P1-149[»]
1VQPX-ray2.25P1-149[»]
1W2BX-ray3.50O2-149[»]
1YHQX-ray2.40P1-149[»]
1YI2X-ray2.65P1-149[»]
1YIJX-ray2.60P1-149[»]
1YITX-ray2.80P1-149[»]
1YJ9X-ray2.90P1-149[»]
1YJNX-ray3.00P1-149[»]
1YJWX-ray2.90P1-149[»]
2OTJX-ray2.90P1-149[»]
2OTLX-ray2.70P1-149[»]
2QA4X-ray3.00P1-149[»]
2QEXX-ray2.90P1-149[»]
3CC2X-ray2.40P1-149[»]
3CC4X-ray2.70P1-149[»]
3CC7X-ray2.70P1-149[»]
3CCEX-ray2.75P1-149[»]
3CCJX-ray2.70P1-149[»]
3CCLX-ray2.90P1-149[»]
3CCMX-ray2.55P1-149[»]
3CCQX-ray2.90P1-149[»]
3CCRX-ray3.00P1-149[»]
3CCSX-ray2.95P1-149[»]
3CCUX-ray2.80P1-149[»]
3CCVX-ray2.90P1-149[»]
3CD6X-ray2.75P1-149[»]
3CMAX-ray2.80P1-149[»]
3CMEX-ray2.95P1-149[»]
3CPWX-ray2.70O1-149[»]
3CXCX-ray3.00O2-149[»]
3G4SX-ray3.20P2-144[»]
3G6EX-ray2.70P2-144[»]
3G71X-ray2.85P2-144[»]
3I55X-ray3.11P1-149[»]
3I56X-ray2.90P1-149[»]
3OW2X-ray2.70O2-144[»]
4ADXelectron microscopy6.60P1-149[»]
4V9FX-ray2.40P1-149[»]
ProteinModelPortaliP14119.
SMRiP14119.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272569.rrnAC1594.

Proteomic databases

PRIDEiP14119.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV46512; AAV46512; rrnAC1594.
GeneIDi3127911.
KEGGihma:rrnAC1594.

Phylogenomic databases

eggNOGiarCOG04089. Archaea.
COG2147. LUCA.
HOGENOMiHOG000231276.
KOiK02885.
OMAiNRVWIDP.

Miscellaneous databases

EvolutionaryTraceiP14119.

Family and domain databases

CDDicd01418. Ribosomal_L19e_A. 1 hit.
Gene3Di1.10.1200.60. 1 hit.
1.10.1650.10. 1 hit.
1.20.5.560. 1 hit.
HAMAPiMF_01475. Ribosomal_L19e. 1 hit.
InterProiIPR000196. Ribosomal_L19/L19e.
IPR023638. Ribosomal_L19/L19e_CS.
IPR015972. Ribosomal_L19/L19e_dom1.
IPR015973. Ribosomal_L19/L19e_dom2.
IPR015974. Ribosomal_L19/L19e_dom3.
IPR033936. Ribosomal_L19e_A.
[Graphical view]
PfamiPF01280. Ribosomal_L19e. 1 hit.
[Graphical view]
SMARTiSM01416. Ribosomal_L19e. 1 hit.
[Graphical view]
SUPFAMiSSF48140. SSF48140. 1 hit.
PROSITEiPS00526. RIBOSOMAL_L19E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL19E_HALMA
AccessioniPrimary (citable) accession number: P14119
Secondary accession number(s): Q5V1U0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 1, 1990
Last sequence update: January 23, 2007
Last modified: November 30, 2016
This is version 124 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.