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Protein

17.6 kDa class I heat shock protein 3

Gene

HSP17.6C

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Keywords - Biological processi

Stress response

Names & Taxonomyi

Protein namesi
Recommended name:
17.6 kDa class I heat shock protein 3
Alternative name(s):
17.6 kDa heat shock protein 3
Short name:
AtHsp17.6C
Gene namesi
Name:HSP17.6C
Ordered Locus Names:At1g53540
ORF Names:F22G10.20
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G53540.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 15715717.6 kDa class I heat shock protein 3PRO_0000125971Add
BLAST

Proteomic databases

PaxDbiP13853.
PRIDEiP13853.

Expressioni

Gene expression databases

GenevisibleiP13853. AT.

Interactioni

Subunit structurei

May form oligomeric structures.

Protein-protein interaction databases

STRINGi3702.AT1G53540.1.

Structurei

3D structure databases

ProteinModelPortaliP13853.
SMRiP13853. Positions 11-157.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the small heat shock protein (HSP20) family.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0710. Eukaryota.
COG0071. LUCA.
InParanoidiP13853.
KOiK13993.
OMAiAFINARI.
OrthoDBiEOG09360TW0.
PhylomeDBiP13853.

Family and domain databases

Gene3Di2.60.40.790. 1 hit.
InterProiIPR002068. A-crystallin/Hsp20_dom.
IPR031107. HSP20.
IPR008978. HSP20-like_chaperone.
[Graphical view]
PANTHERiPTHR11527. PTHR11527. 1 hit.
PfamiPF00011. HSP20. 1 hit.
[Graphical view]
SUPFAMiSSF49764. SSF49764. 1 hit.
PROSITEiPS01031. HSP20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P13853-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLIPSIFGG RRTNVFDPFS LDVFDPFEGF LTPSGLANAP AMDVAAFTNA
60 70 80 90 100
KVDWRETPEA HVFKADLPGL RKEEVKVEVE DGNILQISGE RSNENEEKND
110 120 130 140 150
KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV

KSIDISG
Length:157
Mass (Da):17,604
Last modified:May 27, 2002 - v2
Checksum:iCC07BA4B7F1BD637
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X16076 mRNA. Translation: CAA34208.1.
AC024260 Genomic DNA. Translation: AAG51972.1.
CP002684 Genomic DNA. Translation: AEE32954.1.
BT024697 mRNA. Translation: ABD57522.1.
PIRiS06074.
RefSeqiNP_175759.1. NM_104232.3.
UniGeneiAt.5366.

Genome annotation databases

EnsemblPlantsiAT1G53540.1; AT1G53540.1; AT1G53540.
GeneIDi841789.
GrameneiAT1G53540.1; AT1G53540.1; AT1G53540.
KEGGiath:AT1G53540.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X16076 mRNA. Translation: CAA34208.1.
AC024260 Genomic DNA. Translation: AAG51972.1.
CP002684 Genomic DNA. Translation: AEE32954.1.
BT024697 mRNA. Translation: ABD57522.1.
PIRiS06074.
RefSeqiNP_175759.1. NM_104232.3.
UniGeneiAt.5366.

3D structure databases

ProteinModelPortaliP13853.
SMRiP13853. Positions 11-157.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G53540.1.

Proteomic databases

PaxDbiP13853.
PRIDEiP13853.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G53540.1; AT1G53540.1; AT1G53540.
GeneIDi841789.
GrameneiAT1G53540.1; AT1G53540.1; AT1G53540.
KEGGiath:AT1G53540.

Organism-specific databases

TAIRiAT1G53540.

Phylogenomic databases

eggNOGiKOG0710. Eukaryota.
COG0071. LUCA.
InParanoidiP13853.
KOiK13993.
OMAiAFINARI.
OrthoDBiEOG09360TW0.
PhylomeDBiP13853.

Miscellaneous databases

PROiP13853.

Gene expression databases

GenevisibleiP13853. AT.

Family and domain databases

Gene3Di2.60.40.790. 1 hit.
InterProiIPR002068. A-crystallin/Hsp20_dom.
IPR031107. HSP20.
IPR008978. HSP20-like_chaperone.
[Graphical view]
PANTHERiPTHR11527. PTHR11527. 1 hit.
PfamiPF00011. HSP20. 1 hit.
[Graphical view]
SUPFAMiSSF49764. SSF49764. 1 hit.
PROSITEiPS01031. HSP20. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiHS17C_ARATH
AccessioniPrimary (citable) accession number: P13853
Secondary accession number(s): Q29Q59, Q9C8L3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 1, 1990
Last sequence update: May 27, 2002
Last modified: September 7, 2016
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.