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P13734

- AGAR_PSEAF

UniProt

P13734 - AGAR_PSEAF

Protein

Beta-agarase

Gene

agrA

Organism
Pseudoalteromonas atlantica (Alteromonas atlantica)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 59 (01 Oct 2014)
      Sequence version 1 (01 Jan 1990)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of (1->4)-beta-D-galactosidic linkages in agarose, giving the tetramer as the predominant product.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei200 – 2001Proton donorSequence Analysis
    Active sitei322 – 3221NucleophileSequence Analysis

    GO - Molecular functioni

    1. beta-agarase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH86. Glycoside Hydrolase Family 86.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-agarase (EC:3.2.1.81)
    Gene namesi
    Name:agrA
    OrganismiPseudoalteromonas atlantica (Alteromonas atlantica)
    Taxonomic identifieri288 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2323Add
    BLAST
    Chaini24 – 505482Beta-agarasePRO_0000012252Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliP13734.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 86 family.Curated

    Keywords - Domaini

    Signal

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P13734-1 [UniParc]FASTAAdd to Basket

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    MLKVIPWLLV TSSLVAIPTY IHATTEVVVN LNVKHSVEGK SEFERKNHIK    50
    LHSTLNDNDW QGEEDKLKYM MEELDVYFGR DNGGTVWNFN QAIEDPANIG 100
    YADPQNIIAR GQAQRETNWG QNKSALHQYD GRGDLMIGGQ PRAHYLGNTS 150
    PCCGGSAWQA KGGDAVGDFL GQYVNEFFRS AGDPVTKGHL APVYFEVLNE 200
    PLYQVTDAPH ELGLEQPIPP IDIFTFHNDV ADAFRQHNTH IKIGGFTVAF 250
    PIFEQREFAR WEERMKLFID TSGSHMDVYS THFYDLEDDN RFKGSRLEAT 300
    LDMIDQYSLL ALGETKPHVI SEYGGRNRPM ENAPWSALRD WWFLKTASPM 350
    LMQFLSRPDS VLTSIPFVPI KALWGTAADG TPYNWRLLRQ QKEAPNETGE 400
    NWVFTEMVKF YQLWSDVKGT RVDTFSTNSD FLIDSYVQND KAYVLISNLT 450
    EQAEKIVVHK YGAPASSQPT TRIKHLYLKG AAPRLMKQVM RQISKKSRLL 500
    LKRLW 505
    Length:505
    Mass (Da):57,617
    Last modified:January 1, 1990 - v1
    Checksum:i66B75CBF486280B1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M22725 Genomic DNA. Translation: AAA25696.1.
    PIRiA32261.

    Cross-referencesi

    Web resourcesi

    Worthington enzyme manual

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M22725 Genomic DNA. Translation: AAA25696.1 .
    PIRi A32261.

    3D structure databases

    ProteinModelPortali P13734.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH86. Glycoside Hydrolase Family 86.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the agrA gene encoding beta-agarase from Pseudomonas atlantica."
      Belas R.
      J. Bacteriol. 171:602-605(1989) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

    Entry informationi

    Entry nameiAGAR_PSEAF
    AccessioniPrimary (citable) accession number: P13734
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 1, 1990
    Last sequence update: January 1, 1990
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3