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P12867 (XYLB_ACTM4) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Xylulose kinase

Short name=Xylulokinase
EC=2.7.1.17
Gene names
Name:xylB
Ordered Locus Names:AMIS_10360
OrganismActinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) [Complete proteome] [HAMAP]
Taxonomic identifier512565 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeActinoplanes

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + D-xylulose = ADP + D-xylulose 5-phosphate.

Sequence similarities

Belongs to the FGGY kinase family.

Ontologies

Keywords
   Biological processCarbohydrate metabolism
Xylose metabolism
   LigandATP-binding
Nucleotide-binding
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-xylose metabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

xylulose metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

xylulokinase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 466466Xylulose kinase
PRO_0000059545

Experimental info

Sequence conflict60 – 612DD → EF in CAA34165. Ref.2

Sequences

Sequence LengthMass (Da)Tools
P12867 [UniParc].

Last modified September 5, 2012. Version 3.
Checksum: 8FA3AFD953F03739

FASTA46647,866
        10         20         30         40         50         60 
MALVAGIDSS TQSCKVVIRD AETGALVRQG RASHPDGTEV HPDAWWSALQ SAIEEAGGLD 

        70         80         90        100        110        120 
DVAAASVAGQ QHGMVALDEN GEVVRPALLW NDTRSAGAAA DLIAELGGGE KWAEAVGIVP 

       130        140        150        160        170        180 
VASFTLTKLR WLARNEPANA AKVAAVCLPH DWLTWKLSGS TDIADIKTDR SDASGTLYWS 

       190        200        210        220        230        240 
AKTNEYRRDL LELGFGRDLV LPEVLGPTGI AGHLPNGAPL GPGAGDNAAA ALGTGALPGD 

       250        260        270        280        290        300 
VIVSIGTSGT VFVSSDVAPV DGRGTVAGFA DTTGRFLPIV VTLNAARVLD AAAKLLGVDH 

       310        320        330        340        350        360 
DELSRLALSA PAGADGMVLV PYLEGERTPN RPDATGAIHG LTLKTSDPAH LARAAVEGML 

       370        380        390        400        410        420 
CALADGLDAL VAHGAEANRI VLVGGGARSE AVRRIAPALF GKPVLVPPPG EYVADGAARQ 

       430        440        450        460 
AAWVARGGDT PPAWSAASPE VYEDDPVPLI REQYAAAQNA VIDRTR 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Actinoplanes missouriensis 431 (= NBRC 102363)."
Ohnishi Y., Ishikawa J., Sekine M., Hosoyama A., Harada T., Narita H., Hata T., Konno Y., Tutikane K., Fujita N., Horinouchi S., Hayakawa M.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431.
[2]"Xylose isomerase from Actinoplanes missouriensis: primary structure of the gene and the protein."
Amore R., Hollenberg C.P.
Nucleic Acids Res. 17:7515-7515(1989) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-61.
Strain: ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012319 Genomic DNA. Translation: BAL86256.1.
X16042 Genomic DNA. Translation: CAA34165.1.
PIRS05999.
RefSeqYP_005460772.1. NC_017093.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL86256; BAL86256; AMIS_10360.
GeneID12051266.
KEGGams:AMIS_10360.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00854.
OMAAACGLNR.

Enzyme and pathway databases

BioCycAMIS512565:GL7J-1063-MONOMER.

Family and domain databases

InterProIPR018485. Carb_kinase_FGGY_C.
IPR018483. Carb_kinase_FGGY_CS.
IPR018484. Carb_kinase_FGGY_N.
IPR006000. Xylulokinase.
[Graphical view]
PfamPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01312. XylB. 1 hit.
PROSITEPS00933. FGGY_KINASES_1. 1 hit.
PS00445. FGGY_KINASES_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameXYLB_ACTM4
AccessionPrimary (citable) accession number: P12867
Secondary accession number(s): I0GZR9
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1989
Last sequence update: September 5, 2012
Last modified: April 16, 2014
This is version 60 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families