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Protein

Xylulose kinase

Gene

xylB

Organism
Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + D-xylulose = ADP + D-xylulose 5-phosphate.

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. xylulokinase activity Source: UniProtKB-EC

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-KW
  2. xylulose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Xylose metabolism

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciAMIS512565:GL7J-1063-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylulose kinase (EC:2.7.1.17)
Short name:
Xylulokinase
Gene namesi
Name:xylB
Ordered Locus Names:AMIS_10360
OrganismiActinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431)
Taxonomic identifieri512565 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeActinoplanes
ProteomesiUP000007882 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 466466Xylulose kinasePRO_0000059545Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the FGGY kinase family.Curated

Phylogenomic databases

KOiK00854.
OMAiLPLCECE.

Family and domain databases

InterProiIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR018483. Carb_kinase_FGGY_CS.
IPR018484. Carb_kinase_FGGY_N.
IPR006000. Xylulokinase.
[Graphical view]
PfamiPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000538. GlpK. 1 hit.
TIGRFAMsiTIGR01312. XylB. 1 hit.
PROSITEiPS00933. FGGY_KINASES_1. 1 hit.
PS00445. FGGY_KINASES_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P12867-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALVAGIDSS TQSCKVVIRD AETGALVRQG RASHPDGTEV HPDAWWSALQ
60 70 80 90 100
SAIEEAGGLD DVAAASVAGQ QHGMVALDEN GEVVRPALLW NDTRSAGAAA
110 120 130 140 150
DLIAELGGGE KWAEAVGIVP VASFTLTKLR WLARNEPANA AKVAAVCLPH
160 170 180 190 200
DWLTWKLSGS TDIADIKTDR SDASGTLYWS AKTNEYRRDL LELGFGRDLV
210 220 230 240 250
LPEVLGPTGI AGHLPNGAPL GPGAGDNAAA ALGTGALPGD VIVSIGTSGT
260 270 280 290 300
VFVSSDVAPV DGRGTVAGFA DTTGRFLPIV VTLNAARVLD AAAKLLGVDH
310 320 330 340 350
DELSRLALSA PAGADGMVLV PYLEGERTPN RPDATGAIHG LTLKTSDPAH
360 370 380 390 400
LARAAVEGML CALADGLDAL VAHGAEANRI VLVGGGARSE AVRRIAPALF
410 420 430 440 450
GKPVLVPPPG EYVADGAARQ AAWVARGGDT PPAWSAASPE VYEDDPVPLI
460
REQYAAAQNA VIDRTR
Length:466
Mass (Da):47,866
Last modified:September 5, 2012 - v3
Checksum:i8FA3AFD953F03739
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti60 – 612DD → EF in CAA34165 (PubMed:2798103).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012319 Genomic DNA. Translation: BAL86256.1.
X16042 Genomic DNA. Translation: CAA34165.1.
PIRiS05999.
RefSeqiWP_014441153.1. NC_017093.1.
YP_005460772.1. NC_017093.1.

Genome annotation databases

EnsemblBacteriaiBAL86256; BAL86256; AMIS_10360.
KEGGiams:AMIS_10360.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012319 Genomic DNA. Translation: BAL86256.1.
X16042 Genomic DNA. Translation: CAA34165.1.
PIRiS05999.
RefSeqiWP_014441153.1. NC_017093.1.
YP_005460772.1. NC_017093.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAL86256; BAL86256; AMIS_10360.
KEGGiams:AMIS_10360.

Phylogenomic databases

KOiK00854.
OMAiLPLCECE.

Enzyme and pathway databases

BioCyciAMIS512565:GL7J-1063-MONOMER.

Family and domain databases

InterProiIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR018483. Carb_kinase_FGGY_CS.
IPR018484. Carb_kinase_FGGY_N.
IPR006000. Xylulokinase.
[Graphical view]
PfamiPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000538. GlpK. 1 hit.
TIGRFAMsiTIGR01312. XylB. 1 hit.
PROSITEiPS00933. FGGY_KINASES_1. 1 hit.
PS00445. FGGY_KINASES_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Actinoplanes missouriensis 431 (= NBRC 102363)."
    Ohnishi Y., Ishikawa J., Sekine M., Hosoyama A., Harada T., Narita H., Hata T., Konno Y., Tutikane K., Fujita N., Horinouchi S., Hayakawa M.
    Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431.
  2. "Xylose isomerase from Actinoplanes missouriensis: primary structure of the gene and the protein."
    Amore R., Hollenberg C.P.
    Nucleic Acids Res. 17:7515-7515(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-61.
    Strain: ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431.

Entry informationi

Entry nameiXYLB_ACTM4
AccessioniPrimary (citable) accession number: P12867
Secondary accession number(s): I0GZR9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1989
Last sequence update: September 5, 2012
Last modified: April 1, 2015
This is version 65 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.