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Protein

Nucleoprotein

Gene

N

Organism
Sandfly fever sicilian virus (SFS)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiSandfly fever sicilian virus (SFS)
Taxonomic identifieri28292 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaePhlebovirusunclassified Phlebovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Phlebotomus papatasi (Sandfly) [TaxID: 29031]

Subcellular locationi

Virion
Note: Internal protein of virus particle.

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. ribonucleoprotein complex Source: UniProtKB-KW
  3. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 246246NucleoproteinPRO_0000221996Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP12793.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR009522. Capsid_Phlebovir/Tenuivir.
IPR015971. Nucleocapsid_Phlebovirus.
[Graphical view]
PfamiPF05733. Tenui_N. 1 hit.
[Graphical view]
PIRSFiPIRSF003953. N_PhelboV. 1 hit.

Sequencei

Sequence statusi: Complete.

P12793-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDEYQKIAVE FGEQAIDETV IQDWLQAFAY QGFDARTIIH NLVQLGGKSW
60 70 80 90 100
EEDAKKMIIL SLTRGNKPKK MVERMSPEGA REVKSLVAKY KIVEGRPGRN
110 120 130 140 150
GITLSRVLQP WLGGQSKLWK WLKTSYQSQG AQWTALCGQT YPRQMMHPSF
160 170 180 190 200
AGLIDPSLDQ EDFNAVLDAH KLFLFMFSKT INVSLRGAQK RDIEESFSQP
210 220 230 240
MLAAINSSFI DNTQRRAFLT KFGILTSGAR ATAVVKKIAE VYRKLE
Length:246
Mass (Da):27,896
Last modified:February 1, 1996 - v2
Checksum:i7ED416E06F3449F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J04418 Genomic RNA. Translation: AAA47458.1.
PIRiA30180. VHVUSS.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J04418 Genomic RNA. Translation: AAA47458.1.
PIRiA30180. VHVUSS.

3D structure databases

ProteinModelPortaliP12793.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR009522. Capsid_Phlebovir/Tenuivir.
IPR015971. Nucleocapsid_Phlebovirus.
[Graphical view]
PfamiPF05733. Tenui_N. 1 hit.
[Graphical view]
PIRSFiPIRSF003953. N_PhelboV. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The S RNA segment of Sandfly Fever Sicilian virus: evidence for an ambisense genome."
    Marriott A.C., Ward V.K., Nuttall P.A.
    Virology 169:341-345(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  2. Marriott A.C., Ward V.K., Nuttall P.A.
    Submitted (JAN-1994) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION.

Entry informationi

Entry nameiNCAP_SFSV
AccessioniPrimary (citable) accession number: P12793
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1989
Last sequence update: February 1, 1996
Last modified: February 4, 2015
This is version 57 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.