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Protein

30S ribosomal protein S17

Gene

rps17

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S17UniRule annotation
Alternative name(s):
HS14
HmaS17
Gene namesi
Name:rps17UniRule annotation
Ordered Locus Names:rrnAC1603
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001284972 – 11230S ribosomal protein S17Add BLAST111

Proteomic databases

PRIDEiP12741

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi272569.rrnAC1603

Structurei

3D structure databases

ProteinModelPortaliP12741
SMRiP12741
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS17 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04096 Archaea
COG0186 LUCA
HOGENOMiHOG000231341
KOiK02961
OMAiKKYERYE
OrthoDBiPOG093Z0IP7

Family and domain databases

HAMAPiMF_01345_A Ribosomal_S17_A, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000266 Ribosomal_S17/S11
IPR028333 Ribosomal_S17_arc-typ
IPR019978 Ribosomal_S17_archaeal
IPR019979 Ribosomal_S17_CS
PANTHERiPTHR10744 PTHR10744, 1 hit
PfamiView protein in Pfam
PF00366 Ribosomal_S17, 1 hit
PRINTSiPR00973 RIBOSOMALS17
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001295 Ribosomal_S17, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR03630 uS17_arch, 1 hit
PROSITEiView protein in PROSITE
PS00056 RIBOSOMAL_S17, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P12741-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALGLNVQEP EETCADQNCP FHGELSVRGQ TLNGEVASTD MEKTVVVERE
60 70 80 90 100
YDVKVPKYDR FMKRRSRVPA HAPDCLDLAV GDTVTIAECR PLSKTKSHVV
110
VGVVADEQDG DA
Length:112
Mass (Da):12,272
Last modified:January 23, 2007 - v3
Checksum:i06C6BDEE4AD711CB
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti89C → S (PubMed:2143141).Curated1
Sequence conflicti93S → P (PubMed:2143141).Curated1
Sequence conflicti110 – 111Missing (PubMed:2143141).Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X55311 Genomic DNA Translation: CAA39017.1
AY596297 Genomic DNA Translation: AAV46520.1
PIRiS10733 R3HS17
RefSeqiWP_004591559.1, NC_006396.1

Genome annotation databases

EnsemblBacteriaiAAV46520; AAV46520; rrnAC1603
GeneIDi3128374
KEGGihma:rrnAC1603
PATRICifig|272569.17.peg.2292

Similar proteinsi

Entry informationi

Entry nameiRS17_HALMA
AccessioniPrimary (citable) accession number: P12741
Secondary accession number(s): Q5V1T2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1989
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 108 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

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