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P12414 (NCAP_AINOV) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name=Protein N
Gene names
Name:N
OrganismAino virus
Taxonomic identifier11582 [NCBI]
Taxonomic lineageVirusesssRNA negative-strand virusesBunyaviridaeOrthobunyavirus
Virus hostBos taurus (Bovine) [TaxID: 9913]

Protein attributes

Sequence length233 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Virion. Note: Internal protein of virus particle.

Sequence similarities

Belongs to the orthobunyavirus nucleocapsid protein family.

Ontologies

Keywords
   Cellular componentCapsid protein
Helical capsid protein
Virion
   Coding sequence diversityAlternative initiation
   LigandRNA-binding
Viral nucleoprotein
   Molecular functionRibonucleoprotein
Gene Ontology (GO)
   Cellular_componenthelical viral capsid

Inferred from electronic annotation. Source: UniProtKB-KW

ribonucleoprotein complex

Inferred from electronic annotation. Source: UniProtKB-KW

viral nucleocapsid

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Alternative products

This entry describes 2 isoforms produced by alternative initiation. [Align] [Select]
Isoform N (identifier: P12414-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform NSS (identifier: P12413-1)

The sequence of this isoform can be found in the external entry P12413.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Note: Produced by alternative initiation in the N gene, but encoded on another frame.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 233233Nucleoprotein
PRO_0000221988

Sequences

Sequence LengthMass (Da)Tools
Isoform N [UniParc].

Last modified October 1, 1989. Version 1.
Checksum: 906BE196D69FF16D

FASTA23326,280
        10         20         30         40         50         60 
MANQFIFQDV PQRNLATFNP EVGYVAFIAK HGAQLNFDTV RFFFLNQKKA KMVLSKTAQP 

        70         80         90        100        110        120 
SVDLTFGGIK FTLVNNHFPQ YTANPVPDTA LTLHRLSGYL AKWVADQCKT NQIKLAEAME 

       130        140        150        160        170        180 
KIVMPLAEVK GCTWTEGLTM YLGFAPGAEM FLETFEFYPL VIDMHRVLKD GMDVNFMRKV 

       190        200        210        220        230 
LRQRYGTLTA EQWMTQKIDA VRAAFNAVGQ LSWAKSGFSP AARAFLAQFG INI 

« Hide

Isoform NSS [UniParc].

See P12413.

References

[1]"Localized conserved regions of the S RNA gene products of bunyaviruses are revealed by sequence analyses of the Simbu serogroup Aino virus."
Akashi H., Gay M., Ihara T., Bishop D.H.L.
Virus Res. 1:51-63(1984) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M22011 Genomic RNA. Translation: AAA42543.1.
PIRVHVUAV. S07414.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR001784. Bunya_nucleocap.
[Graphical view]
PfamPF00952. Bunya_nucleocap. 1 hit.
[Graphical view]
PIRSFPIRSF003947. N_OrthobunV. 1 hit.
ProDomPD001909. Bunya_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Entry information

Entry nameNCAP_AINOV
AccessionPrimary (citable) accession number: P12414
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1989
Last sequence update: October 1, 1989
Last modified: October 16, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families