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Protein

Glycinin G3

Gene

GY3

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Glycinin is the major seed storage protein of soybean.

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Seed storage protein, Storage protein

Names & Taxonomyi

Protein namesi
Recommended name:
Glycinin G3
Cleaved into the following 2 chains:
Gene namesi
Name:GY3
OrganismiGlycine max (Soybean) (Glycine hispida)
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
Proteomesi
  • UP000008827 Componenti: Chromosome 19

Pathology & Biotechi

Protein family/group databases

Allergomei5821. Gly m 6.
5824. Gly m 6.0301.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Add
BLAST
Chaini22 – 296275Glycinin A subunitPRO_0000032017Add
BLAST
Chaini297 – 476180Glycinin B subunitPRO_0000032018Add
BLAST
Propeptidei477 – 4815PRO_0000032019

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi31 ↔ 64By similarity
Disulfide bondi107 ↔ 303Interchain (between A and B chains)By similarity

Keywords - PTMi

Disulfide bond

Proteomic databases

PRIDEiP11828.

Expressioni

Gene expression databases

GenevisibleiP11828. GM.

Interactioni

Subunit structurei

Hexamer; each subunit is composed of an acidic and a basic chain derived from a single precursor and linked by a disulfide bond.

Protein-protein interaction databases

STRINGi3847.GLYMA19G34780.1.

Structurei

3D structure databases

ProteinModelPortaliP11828.
SMRiP11828. Positions 29-475.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IHSE. Eukaryota.
ENOG410YATH. LUCA.
InParanoidiP11828.
OMAiWNINAHA.

Family and domain databases

Gene3Di2.60.120.10. 2 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 3 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P11828-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKLVLSLCF LLFSGCCFAF SFREQPQQNE CQIQRLNALK PDNRIESEGG
60 70 80 90 100
FIETWNPNNK PFQCAGVALS RCTLNRNALR RPSYTNAPQE IYIQQGSGIF
110 120 130 140 150
GMIFPGCPST FEEPQQKGQS SRPQDRHQKI YHFREGDLIA VPTGFAYWMY
160 170 180 190 200
NNEDTPVVAV SLIDTNSFQN QLDQMPRRFY LAGNQEQEFL QYQPQKQQGG
210 220 230 240 250
TQSQKGKRQQ EEENEGGSIL SGFAPEFLEH AFVVDRQIVR KLQGENEEEE
260 270 280 290 300
KGAIVTVKGG LSVISPPTEE QQQRPEEEEK PDCDEKDKHC QSQSRNGIDE
310 320 330 340 350
TICTMRLRHN IGQTSSPDIF NPQAGSITTA TSLDFPALSW LKLSAQFGSL
360 370 380 390 400
RKNAMFVPHY NLNANSIIYA LNGRALVQVV NCNGERVFDG ELQEGQVLIV
410 420 430 440 450
PQNFAVAARS QSDNFEYVSF KTNDRPSIGN LAGANSLLNA LPEEVIQQTF
460 470 480
NLRRQQARQV KNNNPFSFLV PPKESQRRVV A
Length:481
Mass (Da):54,242
Last modified:October 1, 1989 - v1
Checksum:i5F3C3148DF6241A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X15123 Genomic DNA. Translation: CAA33217.1.
PIRiS04605.
UniGeneiGma.10058.

Genome annotation databases

EnsemblPlantsiGLYMA19G34780.1; GLYMA19G34780.1; GLYMA19G34780.
GrameneiGLYMA19G34780.1; GLYMA19G34780.1; GLYMA19G34780.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X15123 Genomic DNA. Translation: CAA33217.1.
PIRiS04605.
UniGeneiGma.10058.

3D structure databases

ProteinModelPortaliP11828.
SMRiP11828. Positions 29-475.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3847.GLYMA19G34780.1.

Protein family/group databases

Allergomei5821. Gly m 6.
5824. Gly m 6.0301.

Proteomic databases

PRIDEiP11828.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGLYMA19G34780.1; GLYMA19G34780.1; GLYMA19G34780.
GrameneiGLYMA19G34780.1; GLYMA19G34780.1; GLYMA19G34780.

Phylogenomic databases

eggNOGiENOG410IHSE. Eukaryota.
ENOG410YATH. LUCA.
InParanoidiP11828.
OMAiWNINAHA.

Gene expression databases

GenevisibleiP11828. GM.

Family and domain databases

Gene3Di2.60.120.10. 2 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 3 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Dare.
    Tissue: Leaf.
  2. Cited for: DISCUSSION OF SEQUENCE.

Entry informationi

Entry nameiGLYG3_SOYBN
AccessioniPrimary (citable) accession number: P11828
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1989
Last sequence update: October 1, 1989
Last modified: March 16, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.