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P11428

- SODC2_MAIZE

UniProt

P11428 - SODC2_MAIZE

Protein

Superoxide dismutase [Cu-Zn] 2

Gene

SODCC.1

Organism
Zea mays (Maize)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.

    Cofactori

    Binds 1 copper ion per subunit.By similarity
    Binds 1 zinc ion per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi44 – 441Copper; catalyticBy similarity
    Metal bindingi46 – 461Copper; catalyticBy similarity
    Metal bindingi61 – 611Copper; catalyticBy similarity
    Metal bindingi61 – 611Zinc; structuralBy similarity
    Metal bindingi69 – 691Zinc; structuralBy similarity
    Metal bindingi78 – 781Zinc; structuralBy similarity
    Metal bindingi81 – 811Zinc; structuralBy similarity
    Metal bindingi118 – 1181Copper; catalyticBy similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    GO - Biological processi

    1. cellular response to copper ion Source: EnsemblPlants/Gramene
    2. cellular response to light intensity Source: EnsemblPlants/Gramene
    3. cellular response to ozone Source: EnsemblPlants/Gramene
    4. cellular response to salt stress Source: EnsemblPlants/Gramene
    5. cellular response to sucrose stimulus Source: EnsemblPlants/Gramene
    6. cellular response to UV-B Source: EnsemblPlants/Gramene
    7. defense response to bacterium Source: EnsemblPlants/Gramene
    8. gene silencing by miRNA Source: EnsemblPlants/Gramene
    9. response to iron ion Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Antioxidant, Oxidoreductase

    Keywords - Ligandi

    Copper, Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn] 2 (EC:1.15.1.1)
    Gene namesi
    Name:SODCC.1
    Synonyms:SOD2
    OrganismiZea mays (Maize)
    Taxonomic identifieri4577 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

    Organism-specific databases

    GrameneiP11428.
    MaizeGDBi47586.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 151150Superoxide dismutase [Cu-Zn] 2PRO_0000164141Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi55 ↔ 144By similarity

    Keywords - PTMi

    Disulfide bond

    Proteomic databases

    PRIDEiP11428.

    Interactioni

    Subunit structurei

    Homodimer.

    Structurei

    3D structure databases

    ProteinModelPortaliP11428.
    SMRiP11428. Positions 1-151.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.Curated

    Phylogenomic databases

    HOGENOMiHOG000263447.
    KOiK04565.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    PRINTSiPR00068. CUZNDISMTASE.
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P11428-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVKAVAVLAG TDVKGTIFFS QEGDGPTTVT GSISGLKPGL HGFHVHALGD    50
    TTNGCMSTGP HFNPVGKEHG APEDEDRHAG DLGNVTAGED GVVNVNITDS 100
    QIPLAGPHSI IGRAVVVHAD PDDLGKGGHE LSKSTGNAGG RVACGIIGLQ 150
    G 151
    Length:151
    Mass (Da):15,104
    Last modified:January 23, 2007 - v2
    Checksum:i6B1E8C703B17D216
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M15175 mRNA. Translation: AAA33511.1.
    M54936 mRNA. Translation: AAA33510.1.
    PIRiA29077.
    RefSeqiNP_001105335.1. NM_001111865.1.
    UniGeneiZm.25.

    Genome annotation databases

    GeneIDi542260.
    KEGGizma:542260.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M15175 mRNA. Translation: AAA33511.1 .
    M54936 mRNA. Translation: AAA33510.1 .
    PIRi A29077.
    RefSeqi NP_001105335.1. NM_001111865.1.
    UniGenei Zm.25.

    3D structure databases

    ProteinModelPortali P11428.
    SMRi P11428. Positions 1-151.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi P11428.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 542260.
    KEGGi zma:542260.

    Organism-specific databases

    Gramenei P11428.
    MaizeGDBi 47586.

    Phylogenomic databases

    HOGENOMi HOG000263447.
    KOi K04565.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    PRINTSi PR00068. CUZNDISMTASE.
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning of cDNA for maize superoxide dismutase 2 (SOD2)."
      Cannon R.E., White J.A., Scandalios J.G.
      Proc. Natl. Acad. Sci. U.S.A. 84:179-183(1987) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. "The superoxide dismutase-2 gene of maize."
      Cannon R.E., Scandalios J.G.
      Isozymes Curr. Top. Biol. Med. Res. 14:73-81(1987) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].

    Entry informationi

    Entry nameiSODC2_MAIZE
    AccessioniPrimary (citable) accession number: P11428
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1989
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 104 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3