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Protein

Viral T-cell receptor beta chain-like T17T-22

Gene

V-TCR

Organism
Feline leukemia virus
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Keywords - Molecular functioni

Receptor

Names & Taxonomyi

Protein namesi
Recommended name:
Viral T-cell receptor beta chain-like T17T-22
Gene namesi
Name:V-TCR
OrganismiFeline leukemia virus
Taxonomic identifieri11768 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeGammaretrovirus
Virus hostiFelidae (cat family) [TaxID: 9681]

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828Add
BLAST
Chaini29 – 321293Viral T-cell receptor beta chain-like T17T-22PRO_0000033589Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi105 – 1051N-linked (GlcNAc...); by hostSequence Analysis
Glycosylationi214 – 2141N-linked (GlcNAc...); by hostSequence Analysis
Glycosylationi264 – 2641N-linked (GlcNAc...); by hostSequence Analysis

Keywords - PTMi

Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliP11364.
SMRiP11364. Positions 31-272.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni29 – 12294V segmentAdd
BLAST
Regioni123 – 1286D segment
Regioni129 – 14416J segmentAdd
BLAST
Regioni145 – 321177C regionAdd
BLAST

Keywords - Domaini

Immunoglobulin domain, Signal

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003597. Ig_C1-set.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
[Graphical view]
PfamiPF07654. C1-set. 1 hit.
PF07686. V-set. 1 hit.
[Graphical view]
SMARTiSM00409. IG. 1 hit.
SM00407. IGc1. 1 hit.
[Graphical view]
PROSITEiPS50835. IG_LIKE. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P11364-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MISWLPSVAM GSRLLCCVAL CLLGAGPADS GLTQTPRHLV KARGQQVTLS
60 70 80 90 100
CFPISGHLSL YWYQQAVGQG PQLLIQYYNR EERGKGNFPE RFSAQQFPDS
110 120 130 140 150
HSELNMTSLE LTDSALYLCA SSPNEDSEYG ETLYFGEGSR LTVVEDLKKV
160 170 180 190 200
SPPKVTVFEP SEAEISRTLK ATLVCLATGF YPDHVELSWW VNGKEVRDGV
210 220 230 240 250
STDPEPYKEQ SGANVSSYCL SSRLRVSATF WHNPRNHFRC QVQFHGLGKD
260 270 280 290 300
DQWDYPEAKP VTQNVSADTW GRADCGFTSA SYQQGVLSAT ILYEILLGKA
310 320
TLYAILVSVL ALMAKVKRKD S
Length:321
Mass (Da):35,581
Last modified:July 1, 1989 - v1
Checksum:i11D2C3BF56811129
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X05155 Genomic DNA. Translation: CAA28801.1.
PIRiB26600. RWMVTV.
C26600. RWMVTC.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X05155 Genomic DNA. Translation: CAA28801.1.
PIRiB26600. RWMVTV.
C26600. RWMVTC.

3D structure databases

ProteinModelPortaliP11364.
SMRiP11364. Positions 31-272.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003597. Ig_C1-set.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
[Graphical view]
PfamiPF07654. C1-set. 1 hit.
PF07686. V-set. 1 hit.
[Graphical view]
SMARTiSM00409. IG. 1 hit.
SM00407. IGc1. 1 hit.
[Graphical view]
PROSITEiPS50835. IG_LIKE. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Retroviral transduction of T-cell antigen receptor beta-chain and myc genes."
    Fulton R., Forrest D., McFarlane R., Onions D., Neil J.C.
    Nature 326:190-194(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Fulton R.
    Submitted (DEC-1987) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION TO 158-159.

Entry informationi

Entry nameiTCB_FLV
AccessioniPrimary (citable) accession number: P11364
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: October 1, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.