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P11289 (YFIL_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YfiL
Alternative name(s):
URF2
Gene names
Name:yfiL
Ordered Locus Names:b2602, JW5412
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length121 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 121121Uncharacterized protein YfiL
PRO_0000169268

Sequences

Sequence LengthMass (Da)Tools
P11289 [UniParc].

Last modified December 4, 2007. Version 3.
Checksum: 5B30BD7AFA5258F6

FASTA12113,204
        10         20         30         40         50         60 
MMKKFIAPLL ALLVSGCQID PYTHAPTLTS TDWYDVGMED AISGSAIKDD DAFSDSQADR 

        70         80         90        100        110        120 
GLYLKGYAEG QKKTCQTDFT YARGLSGKSF PASCNNVENA SQLHEVWQKG ADENASTIRL 


N 

« Hide

References

« Hide 'large scale' references
[1]"Nucleotide sequence and transcription of the phenylalanine and tyrosine operons of Escherichia coli K12."
Hudson G.S., Davidson B.E.
J. Mol. Biol. 180:1023-1051(1984) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T. expand/collapse author list , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
DNA Res. 4:91-113(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[4]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M10431 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC75651.2.
AP009048 Genomic DNA. Translation: BAA16488.1.
PIRQQEC89. E65038.
RefSeqNP_417093.2. NC_000913.2.
YP_490825.1. NC_007779.1.

3D structure databases

ProteinModelPortalP11289.
ModBaseSearch...

Protein-protein interaction databases

STRING511145.b2602.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC75651; AAC75651; b2602.
BAA16488; BAA16488; BAA16488.
GeneID12931656.
947106.
KEGGecj:Y75_p2550.
eco:b2602.
PATRIC32120603. VBIEscCol129921_2700.

Organism-specific databases

EchoBASEEB2340.
EcoGeneEG12446. yfiL.

Phylogenomic databases

eggNOGNOG16649.
HOGENOMHOG000123547.
OMAQDGIAGH.
ProtClustDBPRK11443.

Enzyme and pathway databases

BioCycEcoCyc:EG12446-MONOMER.
ECOL316407:JW5412-MONOMER.

Gene expression databases

GenevestigatorP11289.

Family and domain databases

InterProIPR021242. DUF2799.
[Graphical view]
PfamPF10973. DUF2799. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYFIL_ECOLI
AccessionPrimary (citable) accession number: P11289
Secondary accession number(s): P76596, P77004
Entry history
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: December 4, 2007
Last modified: May 1, 2013
This is version 86 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene