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Protein

Uncharacterized protein YfiL

Gene

yfiL

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12446-MONOMER.
ECOL316407:JW5412-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfiL
Alternative name(s):
URF2
Gene namesi
Name:yfiL
Ordered Locus Names:b2602, JW5412
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12446. yfiL.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 121121Uncharacterized protein YfiLPRO_0000169268Add
BLAST

Proteomic databases

PaxDbiP11289.

Interactioni

Protein-protein interaction databases

BioGridi4260650. 204 interactions.
STRINGi511145.b2602.

Structurei

3D structure databases

ProteinModelPortaliP11289.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105QP9. Bacteria.
ENOG4111Z38. LUCA.
HOGENOMiHOG000123547.
OMAiFPASCDT.
OrthoDBiEOG6CS066.

Family and domain databases

InterProiIPR021242. DUF2799.
[Graphical view]
PfamiPF10973. DUF2799. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P11289-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMKKFIAPLL ALLVSGCQID PYTHAPTLTS TDWYDVGMED AISGSAIKDD
60 70 80 90 100
DAFSDSQADR GLYLKGYAEG QKKTCQTDFT YARGLSGKSF PASCNNVENA
110 120
SQLHEVWQKG ADENASTIRL N
Length:121
Mass (Da):13,204
Last modified:December 4, 2007 - v3
Checksum:i5B30BD7AFA5258F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M10431 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC75651.2.
AP009048 Genomic DNA. Translation: BAA16488.1.
PIRiE65038. QQEC89.
RefSeqiNP_417093.2. NC_000913.3.
WP_000976004.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75651; AAC75651; b2602.
BAA16488; BAA16488; BAA16488.
GeneIDi947106.
KEGGiecj:JW5412.
eco:b2602.
PATRICi32120603. VBIEscCol129921_2700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M10431 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC75651.2.
AP009048 Genomic DNA. Translation: BAA16488.1.
PIRiE65038. QQEC89.
RefSeqiNP_417093.2. NC_000913.3.
WP_000976004.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP11289.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260650. 204 interactions.
STRINGi511145.b2602.

Proteomic databases

PaxDbiP11289.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75651; AAC75651; b2602.
BAA16488; BAA16488; BAA16488.
GeneIDi947106.
KEGGiecj:JW5412.
eco:b2602.
PATRICi32120603. VBIEscCol129921_2700.

Organism-specific databases

EchoBASEiEB2340.
EcoGeneiEG12446. yfiL.

Phylogenomic databases

eggNOGiENOG4105QP9. Bacteria.
ENOG4111Z38. LUCA.
HOGENOMiHOG000123547.
OMAiFPASCDT.
OrthoDBiEOG6CS066.

Enzyme and pathway databases

BioCyciEcoCyc:EG12446-MONOMER.
ECOL316407:JW5412-MONOMER.

Miscellaneous databases

PROiP11289.

Family and domain databases

InterProiIPR021242. DUF2799.
[Graphical view]
PfamiPF10973. DUF2799. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence and transcription of the phenylalanine and tyrosine operons of Escherichia coli K12."
    Hudson G.S., Davidson B.E.
    J. Mol. Biol. 180:1023-1051(1984) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
    Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T.
    , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
    DNA Res. 4:91-113(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYFIL_ECOLI
AccessioniPrimary (citable) accession number: P11289
Secondary accession number(s): P76596, P77004
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: December 4, 2007
Last modified: April 13, 2016
This is version 99 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.