Reviewed,
UniProtKB/Swiss-Prot P10986 (ACT4_CAEEL)
Last modified
November 24, 2009.
Version 74.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Actin-4 | ||||
| Gene names |
| ||||
| Organism | Caenorhabditis elegans [Complete proteome] | ||||
| Taxonomic identifier | 6239 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Protein attributes
| Sequence length | 376 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Ref.1 |
| Subcellular location | |
| Miscellaneous | In this organism there are four genes coding for actin. The sequences coded by genes 1 and 3 are identical. There are a few variations in the actins coded by genes 2 and 4. |
| Sequence similarities | Belongs to the actin family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Cytoskeleton |
| Ligand | ATP-binding Nucleotide-binding |
| PTM | Acetylation |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | cytokinesis Inferred from mutant phenotype. Source: WormBase embryonic development ending in birth or egg hatchingInferred from mutant phenotype. Source: WormBase growthInferred from mutant phenotype. Source: WormBase hermaphrodite genitalia developmentInferred from mutant phenotype. Source: WormBase nematode larval developmentInferred from mutant phenotype. Source: WormBase |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-KW cytoskeletonInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW protein bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Propeptide | 1 – 2 | 2 | Removed in mature form By similarity | PRO_0000000654 | |||||
| Chain | 3 – 376 | 374 | Actin-4 | PRO_0000000655 | |||||
Amino acid modifications | |||||||||
| Modified residue | 3 | 1 | N-acetylaspartate By similarity | ||||||
Experimental info | |||||||||
| Sequence conflict | 5 | 1 | E → D in AAA27890. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Wild-type and mutant actin genes in Caenorhabditis elegans." Krause M., Wild M., Rosenzweig B., Hirsh D. J. Mol. Biol. 208:381-392(1989) [PubMed: 2795655] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, SUBCELLULAR LOCATION. |
| [2] | "Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2. |
| [3] | "Actin gene family of Caenorhabditis elegans." Files J.G., Carr S., Hirsh D. J. Mol. Biol. 164:355-375(1983) [PubMed: 6302275] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-86. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| X16799, X16800 Genomic DNA. Translation: CAA34720.1. U64601 Genomic DNA. Translation: AAB04575.1. J01046, J01045 Genomic DNA. Translation: AAA27890.1. | |
| PIR | S27135. |
| RefSeq | NP_508841.1. |
| UniGene | Cel.17615 |
3D structure databases | |
| SMR | P10986. Positions 5-372. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP:27204N. |
| IntAct | P10986. 9 interactions. |
| STRING | P10986. |
Proteomic databases | |
| PRIDE | P10986. |
Genome annotation databases | |
| Ensembl | M03F4.2a; M03F4.2a; M03F4.2; Caenorhabditis elegans. [Genome view] |
| GeneID | 180767. |
| UCSC | M03F4.2a. c. elegans. |
Organism-specific databases | |
| CTD | 180767. |
| WormBase | WBGene00000066. act-4. |
| WormPep | M03F4.2a. CE12358. [WorfDB] |
Phylogenomic databases | |
| OMA | ADSEDIQ |
Gene expression databases | |
| ArrayExpress | P10986. |
Family and domain databases | |
| InterPro | IPR004000. Actin-like. IPR004001. Actin_CS. [Graphical view] |
| PANTHER | PTHR11937. Actin_like. 1 hit. |
| Pfam | PF00022. Actin. 1 hit. [Graphical view] |
| PRINTS | PR00190. ACTIN. |
| SMART | SM00268. ACTIN. 1 hit. [Graphical view] |
| PROSITE | PS00406. ACTINS_1. 1 hit. PS00432. ACTINS_2. 1 hit. PS01132. ACTINS_ACT_LIKE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 910856. |
Entry information
| Entry name | ACT4_CAEEL | ||||||||
| Accession | Primary (citable) accession number: P10986 Secondary accession number(s): Q7YSY2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | Caenorhabditis annotation project | ||||||||
Relevant documents
| Caenorhabditis elegans Caenorhabditis elegans: entries, gene names and cross-references to WormPep |
| SIMILARITY comments Index of protein domains and families |

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