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Protein

Baseplate wedge protein gp11

Gene

11

Organism
Enterobacteria phage T4 (Bacteriophage T4)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:15315755). Involved in the tail assembly.1 Publication2 Publications

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Viral tail assembly, Virus exit from host cell

Protein family/group databases

TCDBi1.K.1.1.1. the gp27/5 t4-baseplate (t4-bp) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Baseplate wedge protein gp11Curated
Alternative name(s):
Gene product 11
Short name:
gp11
Gene namesi
Name:11
OrganismiEnterobacteria phage T4 (Bacteriophage T4)
Taxonomic identifieri10665 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesMyoviridaeTevenvirinaeT4likevirus
Virus hostiEscherichia coli [TaxID: 562]
Proteomesi
  • UP000009087 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

  • virion Source: CACAO
  • virus tail, baseplate Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Viral baseplate protein, Viral tail protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001650011 – 219Baseplate wedge protein gp11Add BLAST219

Expressioni

Inductioni

Expressed in the late phase of the viral replicative cycle.Curated

Interactioni

Subunit structurei

Homotrimer (PubMed:27193680, PubMed:19896486). The gp11 trimer interacts with gp10 trimer and with the short tail fiber (STF) composed of the gp12 trimer (PubMed:27193680). Part of the baseplate macromolecular complex which consists of gp5, gp5.4, gp27 (central spike complex); gp6, gp25, gp53 (inner baseplate); gp7, gp8 (intermediate baseplate); gp9, gp10, gp11, gp12 (peripheral); gp48 and gp54 (proximal region of the tail tube) (PubMed:27193680).2 Publications

Structurei

Secondary structure

1219
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi15 – 17Combined sources3
Turni30 – 32Combined sources3
Helixi40 – 43Combined sources4
Turni44 – 46Combined sources3
Helixi52 – 63Combined sources12
Beta strandi69 – 75Combined sources7
Beta strandi85 – 93Combined sources9
Beta strandi104 – 109Combined sources6
Beta strandi112 – 117Combined sources6
Helixi122 – 138Combined sources17
Beta strandi141 – 148Combined sources8
Beta strandi155 – 162Combined sources8
Beta strandi171 – 173Combined sources3
Beta strandi176 – 184Combined sources9
Beta strandi193 – 201Combined sources9
Beta strandi210 – 217Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1EL6X-ray2.00A/B/C1-219[»]
1PDFelectron microscopy12.00A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R1-219[»]
1TJAelectron microscopy16.00F/G/H1-219[»]
5IV5electron microscopy4.11AF/AG/AH/CI/CJ/DA/FB/FC/FD/HE/HF/HG/L/M/N/i/j/k1-219[»]
5IV7electron microscopy6.77BA/BB/BC/DC/DD/DE/FE/FF/FG/L/M/N/b/c/d/r/s/t1-219[»]
ProteinModelPortaliP10929.
SMRiP10929.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP10929.

Family & Domainsi

Family and domain databases

Gene3Di1.10.286.30. 1 hit.
3.90.1160.10. 1 hit.
InterProiIPR014791. Baseplate_struct_Gp11.
IPR015982. Baseplate_struct_Gp11_N.
IPR015976. Phage_T4_Gp11_C.
[Graphical view]
PfamiPF08677. GP11. 1 hit.
[Graphical view]
SUPFAMiSSF56558. SSF56558. 1 hit.

Sequencei

Sequence statusi: Complete.

P10929-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLLNNKAGV ISRLADFLGF RPKTGDIDVM NRQSVGSVTI SQLAKGFYEP
60 70 80 90 100
NIESAINDVH NFSIKDVGTI ITNKTGVSPE GVSQTDYWAF SGTVTDDSLP
110 120 130 140 150
PGSPITVLVF GLPVSATTGM TAIEFVAKVR VALQEAIASF TAINSYKDHP
160 170 180 190 200
TDGSKLEVTY LDNQKHVLST YSTYGITISQ EIISESKPGY GTWNLLGAQT
210
VTLDNQQTPT VFYHFERTA
Length:219
Mass (Da):23,707
Last modified:July 1, 1989 - v1
Checksum:iC33CDA772470A281
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14192 Genomic DNA. Translation: CAA32397.1.
X06792 Genomic DNA. Translation: CAA29950.1.
AF158101 Genomic DNA. Translation: AAD42416.1.
M26253 Genomic DNA. Translation: AAA32494.1.
PIRiS04084. GLBPT4.
RefSeqiNP_049769.1. NC_000866.4.

Genome annotation databases

GeneIDi1258638.
KEGGivg:1258638.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14192 Genomic DNA. Translation: CAA32397.1.
X06792 Genomic DNA. Translation: CAA29950.1.
AF158101 Genomic DNA. Translation: AAD42416.1.
M26253 Genomic DNA. Translation: AAA32494.1.
PIRiS04084. GLBPT4.
RefSeqiNP_049769.1. NC_000866.4.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1EL6X-ray2.00A/B/C1-219[»]
1PDFelectron microscopy12.00A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R1-219[»]
1TJAelectron microscopy16.00F/G/H1-219[»]
5IV5electron microscopy4.11AF/AG/AH/CI/CJ/DA/FB/FC/FD/HE/HF/HG/L/M/N/i/j/k1-219[»]
5IV7electron microscopy6.77BA/BB/BC/DC/DD/DE/FE/FF/FG/L/M/N/b/c/d/r/s/t1-219[»]
ProteinModelPortaliP10929.
SMRiP10929.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

TCDBi1.K.1.1.1. the gp27/5 t4-baseplate (t4-bp) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1258638.
KEGGivg:1258638.

Miscellaneous databases

EvolutionaryTraceiP10929.

Family and domain databases

Gene3Di1.10.286.30. 1 hit.
3.90.1160.10. 1 hit.
InterProiIPR014791. Baseplate_struct_Gp11.
IPR015982. Baseplate_struct_Gp11_N.
IPR015976. Phage_T4_Gp11_C.
[Graphical view]
PfamiPF08677. GP11. 1 hit.
[Graphical view]
SUPFAMiSSF56558. SSF56558. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiBP11_BPT4
AccessioniPrimary (citable) accession number: P10929
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: November 2, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.