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Protein

Baseplate wedge protein gp11

Gene

11

Organism
Enterobacteria phage T4 (Bacteriophage T4)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:15315755). Involved in the tail assembly.1 Publication1 Publication

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Viral tail assembly, Virus exit from host cell

Protein family/group databases

TCDBi1.K.1.1.1. the gp27/5 t4-baseplate (t4-bp) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Baseplate wedge protein gp11Curated
Alternative name(s):
Gene product 11
Short name:
gp11
Gene namesi
Name:11
OrganismiEnterobacteria phage T4 (Bacteriophage T4)
Taxonomic identifieri10665 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesMyoviridaeTevenvirinaeT4likevirus
Virus hostiEscherichia coli [TaxID: 562]
ProteomesiUP000009087 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

  • virion Source: CACAO
Complete GO annotation...

Keywords - Cellular componenti

Viral baseplate protein, Viral tail protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 219219Baseplate wedge protein gp11PRO_0000165001Add
BLAST

Expressioni

Inductioni

Expressed in the late phase of the viral replicative cycle.Curated

Interactioni

Subunit structurei

Homotrimer. Part of the baseplate macromolecular complex which consists of gp5, gp26, gp27, gp28, gp29 (hub); gp6, gp7, gp8, gp10, gp11, gp25, gp53 (wedge); gp9, gp12, gp48 and gp54.1 Publication1 Publication

Structurei

Secondary structure

1
219
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi15 – 173Combined sources
Turni30 – 323Combined sources
Helixi40 – 434Combined sources
Turni44 – 463Combined sources
Helixi52 – 6312Combined sources
Beta strandi69 – 757Combined sources
Beta strandi85 – 939Combined sources
Beta strandi104 – 1096Combined sources
Beta strandi112 – 1176Combined sources
Helixi122 – 13817Combined sources
Beta strandi141 – 1488Combined sources
Beta strandi155 – 1628Combined sources
Beta strandi171 – 1733Combined sources
Beta strandi176 – 1849Combined sources
Beta strandi193 – 2019Combined sources
Beta strandi210 – 2178Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1EL6X-ray2.00A/B/C1-219[»]
1PDFelectron microscopy12.00A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R1-219[»]
1TJAelectron microscopy16.00F/G/H1-219[»]
ProteinModelPortaliP10929.
SMRiP10929. Positions 12-219.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP10929.

Family & Domainsi

Family and domain databases

Gene3Di1.10.286.30. 1 hit.
3.90.1160.10. 1 hit.
InterProiIPR014791. Baseplate_struct_Gp11.
IPR015982. Baseplate_struct_Gp11_N.
IPR015976. Phage_T4_Gp11_C.
[Graphical view]
PfamiPF08677. GP11. 1 hit.
[Graphical view]
SUPFAMiSSF56558. SSF56558. 1 hit.

Sequencei

Sequence statusi: Complete.

P10929-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLLNNKAGV ISRLADFLGF RPKTGDIDVM NRQSVGSVTI SQLAKGFYEP
60 70 80 90 100
NIESAINDVH NFSIKDVGTI ITNKTGVSPE GVSQTDYWAF SGTVTDDSLP
110 120 130 140 150
PGSPITVLVF GLPVSATTGM TAIEFVAKVR VALQEAIASF TAINSYKDHP
160 170 180 190 200
TDGSKLEVTY LDNQKHVLST YSTYGITISQ EIISESKPGY GTWNLLGAQT
210
VTLDNQQTPT VFYHFERTA
Length:219
Mass (Da):23,707
Last modified:July 1, 1989 - v1
Checksum:iC33CDA772470A281
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14192 Genomic DNA. Translation: CAA32397.1.
X06792 Genomic DNA. Translation: CAA29950.1.
AF158101 Genomic DNA. Translation: AAD42416.1.
M26253 Genomic DNA. Translation: AAA32494.1.
PIRiS04084. GLBPT4.
RefSeqiNP_049769.1. NC_000866.4.

Genome annotation databases

GeneIDi1258638.
KEGGivg:1258638.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14192 Genomic DNA. Translation: CAA32397.1.
X06792 Genomic DNA. Translation: CAA29950.1.
AF158101 Genomic DNA. Translation: AAD42416.1.
M26253 Genomic DNA. Translation: AAA32494.1.
PIRiS04084. GLBPT4.
RefSeqiNP_049769.1. NC_000866.4.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1EL6X-ray2.00A/B/C1-219[»]
1PDFelectron microscopy12.00A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R1-219[»]
1TJAelectron microscopy16.00F/G/H1-219[»]
ProteinModelPortaliP10929.
SMRiP10929. Positions 12-219.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

TCDBi1.K.1.1.1. the gp27/5 t4-baseplate (t4-bp) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1258638.
KEGGivg:1258638.

Miscellaneous databases

EvolutionaryTraceiP10929.

Family and domain databases

Gene3Di1.10.286.30. 1 hit.
3.90.1160.10. 1 hit.
InterProiIPR014791. Baseplate_struct_Gp11.
IPR015982. Baseplate_struct_Gp11_N.
IPR015976. Phage_T4_Gp11_C.
[Graphical view]
PfamiPF08677. GP11. 1 hit.
[Graphical view]
SUPFAMiSSF56558. SSF56558. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: D.
  2. "Using transposon Tn5 insertions to sequence bacteriophage T4 gene 11."
    Barrett B.K., Berget P.B.
    DNA 8:287-295(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: D.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  4. "Nucleotide and deduced amino acid sequence of bacteriophage T4 gene 12."
    Selivanov N.A., Prilipov A.G., Mesyanzhinov V.V.
    Nucleic Acids Res. 16:2334-2334(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 211-219.
    Strain: D.
  5. "Structure of the bacteriophage T4 baseplate as determined by chemical cross-linking."
    Watts N.R., Coombs D.H.
    J. Virol. 64:143-154(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION.
  6. Cited for: REVIEW.
  7. Cited for: REVIEW ON FUNCTION.
  8. "The baseplate wedges of bacteriophage T4 spontaneously assemble into hubless baseplate-like structure in vitro."
    Yap M.L., Mio K., Leiman P.G., Kanamaru S., Arisaka F.
    J. Mol. Biol. 395:349-360(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBUNIT.
  9. "Three-dimensional rearrangement of proteins in the tail of bacteriophage T4 on infection of its host."
    Leiman P.G., Chipman P.R., Kostyuchenko V.A., Mesyanzhinov V.V., Rossmann M.G.
    Cell 118:419-429(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (17.0 ANGSTROMS) OF THE CONTRACTED TAIL, SUBCELLULAR LOCATION, FUNCTION.
  10. "Structure of bacteriophage T4 gene product 11, the interface between the baseplate and short tail fibers."
    Leiman P.G., Kostyuchenko V.A., Shneider M.M., Kurochkina L.P., Mesyanzhinov V.V., Rossmann M.G.
    J. Mol. Biol. 301:975-985(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS) OF 12-219, SUBUNIT.

Entry informationi

Entry nameiBP11_BPT4
AccessioniPrimary (citable) accession number: P10929
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: May 27, 2015
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.