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P10927

- VG09_BPT4

UniProt

P10927 - VG09_BPT4

Protein

Baseplate structural protein Gp9

Gene

9

Organism
Enterobacteria phage T4 (Bacteriophage T4)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 83 (01 Oct 2014)
      Sequence version 1 (01 Jul 1989)
      Previous versions | rss
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    Functioni

    Structural component of the baseplate. Connects the long tail fibers to the baseplate and triggers the tail contraction after virus attachment to a host cell.

    GO - Biological processi

    1. viral life cycle Source: InterPro

    Protein family/group databases

    TCDBi1.K.1.1.1. the gp27/5 t4-baseplate (t4-bp) family.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Baseplate structural protein Gp9
    Alternative name(s):
    Baseplate wedge protein 9
    Gene namesi
    Name:9
    OrganismiEnterobacteria phage T4 (Bacteriophage T4)
    Taxonomic identifieri10665 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesMyoviridaeTevenvirinaeT4likevirus
    Virus hostiEscherichia coli [TaxID: 562]
    ProteomesiUP000009087: Genome

    Subcellular locationi

    Virion Curated

    GO - Cellular componenti

    1. virion Source: CACAO

    Keywords - Cellular componenti

    Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 288288Baseplate structural protein Gp9PRO_0000164999Add
    BLAST

    Interactioni

    Subunit structurei

    Homotrimer.

    Structurei

    Secondary structure

    1
    288
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi15 – 195
    Helixi20 – 3920
    Helixi45 – 495
    Beta strandi50 – 534
    Helixi74 – 763
    Beta strandi84 – 863
    Beta strandi90 – 923
    Beta strandi94 – 985
    Beta strandi106 – 1105
    Beta strandi118 – 1203
    Beta strandi122 – 1309
    Beta strandi134 – 1396
    Beta strandi144 – 1529
    Beta strandi154 – 1563
    Beta strandi159 – 16911
    Beta strandi176 – 1805
    Beta strandi185 – 1939
    Turni194 – 1963
    Beta strandi198 – 20811
    Beta strandi214 – 22411
    Turni225 – 2284
    Beta strandi229 – 24113
    Beta strandi243 – 2475
    Beta strandi251 – 2577
    Beta strandi260 – 2667
    Beta strandi268 – 28215

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1PDPelectron microscopy12.00A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R1-288[»]
    1QEXX-ray2.30A/B1-288[»]
    1S2EX-ray2.30A/B1-288[»]
    1TJAelectron microscopy16.00C/D/E1-288[»]
    1ZKUelectron microscopy15.00A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R1-288[»]
    ProteinModelPortaliP10927.
    SMRiP10927. Positions 1-288.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP10927.

    Family & Domainsi

    Family and domain databases

    Gene3Di2.60.120.640. 1 hit.
    2.60.40.1680. 1 hit.
    InterProiIPR008987. Baseplate_struct_prot_Gp9/10.
    IPR027412. Gp9_C_dom.
    IPR027411. Gp9_mid_dom.
    [Graphical view]
    PfamiPF07880. T4_gp9_10. 1 hit.
    [Graphical view]
    SUPFAMiSSF50017. SSF50017. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P10927-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFIQEPKKLI DTGEIGNAST GDILFDGGNK INSDFNAIYN AFGDQRKMAV    50
    ANGTGADGQI IHATGYYQKH SITEYATPVK VGTRHDIDTS TVGVKVIIER 100
    GELGDCVEFI NSNGSISVTN PLTIQAIDSI KGVSGNLVVT SPYSKVTLRC 150
    ISSDNSTSVW NYSIESMFGQ KESPAEGTWN ISTSGSVDIP LFHRTEYNMA 200
    KLLVTCQSVD GRKIKTAEIN ILVDTVNSEV ISSEYAVMRV GNETEEDEIA 250
    NIAFSIKENY VTATISSSTV GMRAAVKVIA TQKIGVAQ 288
    Length:288
    Mass (Da):30,997
    Last modified:July 1, 1989 - v1
    Checksum:i8028FCEBA25BB760
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X14192 Genomic DNA. Translation: CAA32395.1.
    AF158101 Genomic DNA. Translation: AAD42520.1.
    PIRiS04082. GNBPT4.
    RefSeqiNP_049767.1. NC_000866.4.

    Genome annotation databases

    GeneIDi1258617.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X14192 Genomic DNA. Translation: CAA32395.1 .
    AF158101 Genomic DNA. Translation: AAD42520.1 .
    PIRi S04082. GNBPT4.
    RefSeqi NP_049767.1. NC_000866.4.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1PDP electron microscopy 12.00 A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R 1-288 [» ]
    1QEX X-ray 2.30 A/B 1-288 [» ]
    1S2E X-ray 2.30 A/B 1-288 [» ]
    1TJA electron microscopy 16.00 C/D/E 1-288 [» ]
    1ZKU electron microscopy 15.00 A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R 1-288 [» ]
    ProteinModelPortali P10927.
    SMRi P10927. Positions 1-288.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    TCDBi 1.K.1.1.1. the gp27/5 t4-baseplate (t4-bp) family.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1258617.

    Miscellaneous databases

    EvolutionaryTracei P10927.

    Family and domain databases

    Gene3Di 2.60.120.640. 1 hit.
    2.60.40.1680. 1 hit.
    InterProi IPR008987. Baseplate_struct_prot_Gp9/10.
    IPR027412. Gp9_C_dom.
    IPR027411. Gp9_mid_dom.
    [Graphical view ]
    Pfami PF07880. T4_gp9_10. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50017. SSF50017. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: D.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. "The structure of bacteriophage T4 gene product 9: the trigger for tail contraction."
      Kostyuchenko V.A., Navruzbekov G.A., Kurochkina L.P., Strelkov S.V., Mesyanzhinov V.V., Rossmann M.G.
      Structure 7:1213-1222(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.3 ANGSTROMS).

    Entry informationi

    Entry nameiVG09_BPT4
    AccessioniPrimary (citable) accession number: P10927
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 1989
    Last sequence update: July 1, 1989
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references

    External Data

    Dasty 3