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Protein

Movement protein

Gene

ORF3

Organism
Red clover necrotic mosaic virus (RCNMV)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Cell-to-cell movement and long-distance transport of the viral infection. Also acts as a suppressor of RNA-mediated gene silencing, also known as post-transcriptional gene silencing (PTGS), a mechanism of plant viral defense that limits the accumulation of viral RNAs.1 Publication

GO - Biological processi

  1. transport of virus in host, cell to cell Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Suppressor of RNA silencing, Viral movement protein

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Movement protein
Short name:
MP
Gene namesi
ORF Names:ORF3
OrganismiRed clover necrotic mosaic virus (RCNMV)
Taxonomic identifieri12267 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageTombusviridaeDianthovirus
Virus hostiMedicago sativa (Alfalfa) [TaxID: 3879]
Melilotus officinalis (Yellow sweet clover) (Trifolium officinale) [TaxID: 47083]
Trifolium pratense (Red clover) [TaxID: 57577]
Trifolium repens (Creeping white clover) [TaxID: 3899]
ProteomesiUP000008651: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 317317Movement proteinPRO_0000222898Add
BLAST

Family & Domainsi

Family and domain databases

InterProiIPR000603. 3A/RNA2_movement_prot.
[Graphical view]
PfamiPF00803. 3A. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P10838-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVHVENLSD LAKTNDGVAV SLNRYTDWKC RSGVSEAPLI PASMMSKITD
60 70 80 90 100
YAKTTAKGNS VALNYTHVVL SLAPTIGVAI PGHVTVELIN PNVEGPFQVM
110 120 130 140 150
SGQTLSWSPG AGKPCLMIFS VHHQLNSDHE PFRVRITNTG IPTKKSYARC
160 170 180 190 200
HAYWGFDVGT RHRYYKSEPA RLIELEVGYQ RTLLSSIKAV EAYVQFTFDT
210 220 230 240 250
SRMEKNPQLC TKSNVNIIPP KAETGSIRGI APPLSVVPNQ GRESKVLKQK
260 270 280 290 300
GGTGSKTTKL PSLEPSSGSS SGLSMSRRSH RNVLNSSIPI KRNQDGNWLG
310
DHLSDKGRVT DPNPERL
Length:317
Mass (Da):34,647
Last modified:July 1, 1989 - v1
Checksum:iD35D428028740AA1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X08021 Genomic RNA. Translation: CAA30822.1.
PIRiS01412.
RefSeqiNP_620546.1. NC_003775.1.

Genome annotation databases

GeneIDi956633.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X08021 Genomic RNA. Translation: CAA30822.1.
PIRiS01412.
RefSeqiNP_620546.1. NC_003775.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi956633.

Family and domain databases

InterProiIPR000603. 3A/RNA2_movement_prot.
[Graphical view]
PfamiPF00803. 3A. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The nucleotide sequence and gene organization of red clover necrotic mosaic virus RNA-2."
    Lommel S.A., Weston Fina M., Xiong Z., Lomonossoff G.P.
    Nucleic Acids Res. 16:8587-8602(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
    Strain: Australian.
  2. "The Red clover necrotic mosaic virus RNA-2 encoded movement protein is a second suppressor of RNA silencing."
    Powers J.G., Sit T.L., Heinsohn C., George C.G., Kim K.-H., Lommel S.A.
    Virology 381:277-286(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION.

Entry informationi

Entry nameiMP_RCNMV
AccessioniPrimary (citable) accession number: P10838
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: January 7, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.