Reviewed,
UniProtKB/Swiss-Prot P10809 (CH60_HUMAN)
Last modified
June 16, 2009.
Version 118.
History...
Clusters with 100%,
90%,
50% identity |
Documents (5) |
Third-party data |
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Names and origin
| Protein names | Recommended name: 60 kDa heat shock protein, mitochondrial Alternative name(s): Heat shock protein 60 Short name=HSP-60 Short name=Hsp60 60 kDa chaperonin Chaperonin 60 Short name=CPN60 Mitochondrial matrix protein P1 P60 lymphocyte protein HuCHA60 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 573 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Implicated in mitochondrial protein import and macromolecular assembly. May facilitate the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix. |
| Subunit structure | Interacts with HBV protein X and HTLV-1 protein p40tax. Ref.9 Ref.19 |
| Subcellular location | |
| Involvement in disease | Defects in HSPD1 are a cause of spastic paraplegia autosomal dominant type 13 (SPG13) [MIM:605280]. Spastic paraplegia is a degenerative spinal cord disorder characterized by a slow, gradual, progressive weakness and spasticity of the lower limbs. Ref.24 Defects in HSPD1 are the cause of leukodystrophy hypomyelinating type 4 (HLD4) [MIM:612233]; also called mitochondrial HSP60 chaperonopathy or MitCHAP-60 disease. HLD4 is a severe autosomal recessive hypomyelinating leukodystrophy. Clinically characterized by infantile-onset rotary nystagmus, progressive spastic paraplegia, neurologic regression, motor impairment, profound mental retardation. Death usually occurrs within the first 2 decades of life. |
| Sequence similarities | Belongs to the chaperonin (HSP60) family. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Transit peptide | 1 – 26 | 26 | Mitochondrion Ref.9 Ref.7 Ref.8 Ref.10 Ref.11 Ref.12 Ref.13 | ||||||
| Chain | 27 – 573 | 547 | 60 kDa heat shock protein, mitochondrial | PRO_0000005026 | |||||
Amino acid modifications | |||||||||
| Modified residue | 70 | 1 | Phosphoserine Ref.21 Ref.22 | ||||||
| Modified residue | 223 | 1 | Phosphotyrosine By similarity | ||||||
| Modified residue | 227 | 1 | Phosphotyrosine Ref.20 | ||||||
Natural variations | |||||||||
| Natural variant | 29 | 1 | D → G in HLD4; transfection with the mutant protein impairs cell growth that worsens with increasing temperature. Ref.25 | VAR_054785 | |||||
| Natural variant | 98 | 1 | V → I in SPG13. Ref.24 | VAR_026748 | |||||
Experimental info | |||||||||
| Sequence conflict | 67 | 1 | S → G in AAA36022. Ref.2 | ||||||
| Sequence conflict | 111 | 1 | D → N in BAG35173. Ref.5 | ||||||
| Sequence conflict | 177 | 1 | N → S in BAG35173. Ref.5 | ||||||
| Sequence conflict | 202 | 1 | K → KAS in ABB01006. Ref.4 | ||||||
| Sequence conflict | 260 | 1 | A → T in BAG35173. Ref.5 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Primary structure of a human mitochondrial protein homologous to the bacterial and plant chaperonins and to the 65-kilodalton mycobacterial antigen." Jindal S., Dudani A.K., Singh B., Harley C.B., Gupta R.S. Mol. Cell. Biol. 9:2279-2283(1989) [PubMed: 2568584] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "Nucleotide sequences and novel structural features of human and Chinese hamster hsp60 (chaperonin) gene families." Venner T.J., Singh B., Gupta R.S. DNA Cell Biol. 9:545-552(1990) [PubMed: 1980192] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [3] | "Genomic structure of the human mitochondrial chaperonin genes: HSP60 and HSP10 are localised head to head on chromosome 2 separated by a bidirectional promoter." Hansen J.J., Bross P., Westergaard M., Nielsen M.N., Eiberg H., Boerglum A.D., Mogensen J., Kristiansen K., Bolund L., Gregersen N. Hum. Genet. 112:71-77(2003) [PubMed: 12483302] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [4] | "Genetic variation in immune response genes." Tan J., Ong R., Hibberd M.L., Seielstad M. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [5] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Adrenal gland. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Lung, Skin and Uterus. |
| [7] | "Amino-acid sequence homology of a polymorphic cellular protein from human lymphocytes and the chaperonins from Escherichia coli (groEL) and chloroplasts (Rubisco-binding protein)." Waldinger D., Eckerskorn C., Lottspeich F., Cleve H. Biol. Chem. Hoppe-Seyler 369:1185-1189(1988) [PubMed: 2907406] [Abstract] Cited for: PROTEIN SEQUENCE OF 27-573. |
| [8] | "Development of a database of amino acid sequences for human colon carcinoma proteins separated by two-dimensional polyacrylamide gel electrophoresis." Ward L.D., Hong J., Whitehead R.H., Simpson R.J. Electrophoresis 11:883-891(1990) [PubMed: 2079031] [Abstract] Cited for: PROTEIN SEQUENCE OF 27-55. Tissue: Colon carcinoma. |
| [9] | "Complex formation of human T-cell leukemia virus type I p40tax transactivator with cellular polypeptides." Nagata K., Ide Y., Takagi T., Ohtani K., Aoshima M., Tozawa H., Nakamura M., Sugamura K. J. Virol. 66:1040-1049(1992) [PubMed: 1731090] [Abstract] Cited for: PROTEIN SEQUENCE OF 27-55, INTERACTION WITH HTLV-1 P40TAX. |
| [10] | "Two-dimensional electrophoretic analysis of human breast carcinoma proteins: mapping of proteins that bind to the SH3 domain of mixed lineage kinase MLK2." Rasmussen R.K., Ji H., Eddes J.S., Moritz R.L., Reid G.E., Simpson R.J., Dorow D.S. Electrophoresis 18:588-598(1997) [PubMed: 9150946] [Abstract] Cited for: PROTEIN SEQUENCE OF 27-50. Tissue: Mammary carcinoma. |
| [11] | "The human myocardial two-dimensional gel protein database: update 1994." Corbett J.M., Wheeler C.H., Baker C.S., Yacoub M.H., Dunn M.J. Electrophoresis 15:1459-1465(1994) [PubMed: 7895732] [Abstract] Cited for: PROTEIN SEQUENCE OF 27-46. Tissue: Heart. |
| [12] | "Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides." Gevaert K., Goethals M., Martens L., Van Damme J., Staes A., Thomas G.R., Vandekerckhove J. Nat. Biotechnol. 21:566-569(2003) [PubMed: 12665801] [Abstract] Cited for: PROTEIN SEQUENCE OF 27-37. Tissue: Platelet. |
| [13] | "Human liver protein map: a reference database established by microsequencing and gel comparison." Hochstrasser D.F., Frutiger S., Paquet N., Bairoch A., Ravier F., Pasquali C., Sanchez J.-C., Tissot J.-D., Bjellqvist B., Vargas R., Appel R.D., Hughes G.J. Electrophoresis 13:992-1001(1992) [PubMed: 1286669] [Abstract] Cited for: PROTEIN SEQUENCE OF 27-35. Tissue: Liver. |
| [14] | Bienvenut W.V. Submitted (OCT-2004) to UniProtKB Cited for: PROTEIN SEQUENCE OF 61-72, MASS SPECTROMETRY. Tissue: B-cell lymphoma. |
| [15] | Lubec G., Vishwanath V., Chen W.-Q., Sun Y. Submitted (DEC-2008) to UniProtKB Cited for: PROTEIN SEQUENCE OF 61-72; 206-218; 237-249; 251-290; 430-446 AND 463-469, MASS SPECTROMETRY. Tissue: Brain, Cajal-Retzius cell and Fetal brain cortex. |
| [16] | "Vectorial proteomics reveal targeting, phosphorylation and specific fragmentation of polymerase I and transcript release factor (PTRF) at the surface of caveolae in human adipocytes." Aboulaich N., Vainonen J.P., Stralfors P., Vener A.V. Biochem. J. 383:237-248(2004) [PubMed: 15242332] [Abstract] Cited for: PROTEIN SEQUENCE OF 97-121; 251-268 AND 430-446. Tissue: Adipocyte. |
| [17] | "A two-dimensional gel database of human colon carcinoma proteins." Ji H., Reid G.E., Moritz R.L., Eddes J.S., Burgess A.W., Simpson R.J. Electrophoresis 18:605-613(1997) [PubMed: 9150948] [Abstract] Cited for: PARTIAL PROTEIN SEQUENCE. Tissue: Colon carcinoma. |
| [18] | "Mitochondrial import of the human chaperonin (HSP60) protein." Singh B., Patel H.V., Ridley R.G., Freeman K.B., Gupta R.S. Biochem. Biophys. Res. Commun. 169:391-396(1990) [PubMed: 1972619] [Abstract] Cited for: MITOCHONDRIAL IMPORT. |
| [19] | "Interaction of the hepatitis B virus X protein (HBx) with heat shock protein 60 enhances HBx-mediated apoptosis." Tanaka Y., Kanai F., Kawakami T., Tateishi K., Ijichi H., Kawabe T., Arakawa Y., Kawakami T., Nishimura T., Shirakata Y., Koike K., Omata M. Biochem. Biophys. Res. Commun. 318:461-469(2004) [PubMed: 15120623] [Abstract] Cited for: INTERACTION WITH HBV PROTEIN X. |
| [20] | "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells." Rush J., Moritz A., Lee K.A., Guo A., Goss V.L., Spek E.J., Zhang H., Zha X.-M., Polakiewicz R.D., Comb M.J. Nat. Biotechnol. 23:94-101(2005) [PubMed: 15592455] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-227, MASS SPECTROMETRY. |
| [21] | "A probability-based approach for high-throughput protein phosphorylation analysis and site localization." Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P. Nat. Biotechnol. 24:1285-1292(2006) [PubMed: 16964243] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-70, MASS SPECTROMETRY. Tissue: Epithelium. |
| [22] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-70, MASS SPECTROMETRY. |
| [23] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
| [24] | "Hereditary spastic paraplegia SPG13 is associated with a mutation in the gene encoding the mitochondrial chaperonin Hsp60." Hansen J.J., Durr A., Cournu-Rebeix I., Georgopoulos C., Ang D., Nielsen M.N., Davoine C.-S., Brice A., Fontaine B., Gregersen N., Bross P. Am. J. Hum. Genet. 70:1328-1332(2002) [PubMed: 11898127] [Abstract] Cited for: VARIANT SPG13 ILE-98. |
| [25] | "Mitochondrial Hsp60 chaperonopathy causes an autosomal-recessive neurodegenerative disorder linked to brain hypomyelination and leukodystrophy." Magen D., Georgopoulos C., Bross P., Ang D., Segev Y., Goldsher D., Nemirovski A., Shahar E., Ravid S., Luder A., Heno B., Gershoni-Baruch R., Skorecki K., Mandel H. Am. J. Hum. Genet. 83:30-42(2008) [PubMed: 18571143] [Abstract] Cited for: VARIANT HLD4 GLY-29, CHARACTERIZATION OF VARIANT HLD4 GLY-29. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| M22382 mRNA. Translation: AAA60127.1. M34664 mRNA. Translation: AAA36022.1. AJ250915 Genomic DNA. Translation: CAB75426.1. DQ217936 Genomic DNA. Translation: ABB01006.1. AK312240 mRNA. Translation: BAG35173.1. BC002676 mRNA. Translation: AAH02676.1. BC003030 mRNA. Translation: AAH03030.1. BC067082 mRNA. Translation: AAH67082.1. BC073746 mRNA. Translation: AAH73746.1. | |
| IPI | IPI00784154. |
| PIR | A32800. |
| RefSeq | NP_002147.2. NP_955472.1. |
| UniGene | Hs.595053 Hs.632539 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1GR5 based on UniProtKB P06139. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP:58N. |
| IntAct | P10809. 18 interactions. |
PTM databases | |
| PhosphoSite | P10809. |
2-D gel databases | |
| SWISS-2DPAGE | P10809. |
| DOSAC-COBS-2DPAGE | P10809. |
| HSC-2DPAGE | P10809. |
| OGP | P10809. |
| PHCI-2DPAGE | P10809. |
| PMMA-2DPAGE | P10809. |
| REPRODUCTION-2DPAGE | IPI00784154. P10809. |
| Siena-2DPAGE | P10809. |
Proteomic databases | |
| PRIDE | P10809. |
Genome annotation databases | |
| Ensembl | ENSG00000144381. Homo sapiens. [Contig view] |
| GeneID | 3329. |
| KEGG | hsa:3329. |
Organism-specific databases | |
| GeneCards | GC02M198059. |
| H-InvDB | HIX0002709. HIX0032624. |
| HGNC | HGNC:5261. HSPD1. |
| HPA | CAB002775. HPA001523. |
| MIM | 118190. gene. 605280. phenotype. 612233. phenotype. |
| Orphanet | 100994. Autosomal dominant spastic paraplegia, type 13. 685. Familial spastic paraplegia. 702. Pelizaeus-Merzbacher disease. |
| PharmGKB | PA29527. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOVERGEN | P10809. |
| OMA | P10809. AKGQKCE. |
Gene expression databases | |
| ArrayExpress | P10809. |
| Bgee | P10809. |
| CleanEx | HS_HSPD1. |
| GermOnline | ENSG00000144381. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR018370. Chaperonin_Cpn60_CS. IPR001844. Chaprnin_Cpn60. IPR002423. Cpn60/TCP-1. [Graphical view] |
| PANTHER | PTHR11353. Cpn60/TCP-1. 1 hit. |
| Pfam | PF00118. Cpn60_TCP1. 1 hit. [Graphical view] |
| PRINTS | PR00298. CHAPERONIN60. |
| TIGRFAMs | TIGR02348. GroEL. 1 hit. |
| PROSITE | PS00296. CHAPERONINS_CPN60. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 13188. |
| SOURCE | Search... |
Entry information
| Entry name | CH60_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P10809 Secondary accession number(s): B2R5M6, Q38L19, Q9UCR6 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| Human chromosome 2 Human chromosome 2: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


