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Reviewed, UniProtKB/Swiss-Prot P10357 (V70K_TYMV)

Last modified July 22, 2008. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    69 kDa protein
Alternative name(s):
    p69
OrganismTurnip yellow mosaic virus
Taxonomic identifier12154 [NCBI]
Taxonomic lineageVirusesssRNA positive-strand viruses, no DNA stageTymoviridaeTymovirus
Virus hostBrassica [TaxID: 3705]
Cardamine lilacina [TaxID: 82359]

Protein attributes

Sequence length628 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Acts as a suppressor of RNA-mediated gene silencing, also known as post-transcriptional gene silencing (PTGS), a mechanism of plant viral defense that limits the accumulation of viral RNAs. Ref.2

Sequence similarities

Belongs to the tymoviruses 45 to 70 kDa protein family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 62862869 kDa protein
PRO_0000222943

Sequences

Sequence LengthMass (Da)Tools
P10357-1 [UniParc].

Last modified August 1, 1992. Version 2.
Checksum: 9B01CE5ADFCEAC77

FASTA62869,195
        10         20         30         40         50         60 
MSNGLPISIG RPCTHDSQRS LSAPDSRIHS GFNSLLDTDL PMVHSEGTST PTQLLRHPNI 

        70         80         90        100        110        120 
WFGNLPPPPR RPQDNRDFSP LHPLVFPGHH SQLRHVHETQ QVQQTCPGKL KLSGAEELPP 

       130        140        150        160        170        180 
APQRQHSLPL HITRPSRFPH HFHARRPDVL PSVPDHGPVL TETKPRTSVR QPRSATRGPS 

       190        200        210        220        230        240 
FRPILLPKVV HVHDDPPHSS LRPRGSRSRQ LQPTVRRPLL APNQFHSPRQ PPPLSDDPGI 

       250        260        270        280        290        300 
LGPRPLAPHS TRDPPPRPIT PGPSNTHDLR PLSVLPRTSP RRGLLPNPRR HRTSTGHIPP 

       310        320        330        340        350        360 
TTTSRPTGPP SRLQRPVHLY QSSPHTPNFR PSSIRKDALL QTGPRLGHLE RLGQPANLRT 

       370        380        390        400        410        420 
SERSPPTKRR LPRSSEPNRL PKPLPEATLA PSYRHRRPYP LLPNPPAALP SIAYTSSRGK 

       430        440        450        460        470        480 
IHHSLPKGAL PKEGAPPPPR RLPSPAPRPQ LPLRDLGRTP GFPTPPKTPT RTPESRITAS 

       490        500        510        520        530        540 
PTDIAPLDSD PVLSVRTEVH APERRTFMDP EALRSALASL PSPPRSVGII HTAPQTVLPA 

       550        560        570        580        590        600 
NPPSPTRHLP PTSPPWILQS PVGEDAIVDS EDDSISSFHS HDFDSPSGPL RSQSPSRFRL 

       610        620 
HLRSPSTSSG IEPWSPASYD YGSAPDTD 

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References

[1]"Overlapping open reading frames revealed by complete nucleotide sequencing of turnip yellow mosaic virus genomic RNA."
Morch M.D., Boyer J.C., Haenni A.L.
Nucleic Acids Res. 16:6157-6173(1988) [PubMed: 3399388] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]"Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microrna in host gene expression."
Chen J., Li W.X., Xie D., Peng J.R., Ding S.W.
Plant Cell 16:1302-1313(2004) [PubMed: 15100397] [Abstract]
Cited for: FUNCTION.
Strain: Blue Lake.

Cross-references

Sequence databases

X07441 Genomic RNA. Translation: CAA30321.1. Sequence problems.
PIRS01955.
RefSeqNP_663296.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID951156.

Family and domain databases

InterProIPR004935. 45/70kDa_tymoviral.
[Graphical view]
PfamPF03251. Tymo_45kd_70kd. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameV70K_TYMV
AccessionPrimary (citable) accession number: P10357
Entry history
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: August 1, 1992
Last modified: July 22, 2008
This is version 33 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectVirus (Virus annotation project)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents