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Protein

Protein UL56

Gene

UL56

Organism
Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein UL56
Gene namesi
Name:UL56
OrganismiHuman herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1)
Taxonomic identifieri10299 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeAlphaherpesvirinaeSimplexvirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
ProteomesiUP000009294 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 197197Protein UL56PRO_0000116123Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the herpesviridae UL56 family.Curated

Family and domain databases

InterProiIPR007620. Herpes_UL56.
[Graphical view]
PfamiPF04534. Herpes_UL56. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P10240-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASEAAQPDA GLWSAGNAFA DPPPPYDSLS GRNEGPFVVI DLDTPTDPPP
60 70 80 90 100
PYSAGPLLSV PIPPTSSGEG EASERGRSRQ AAQRAARRAR RRAERRAQRR
110 120 130 140 150
SFGPGGLLAT PLFLPETRLV APPDITRDLL SGLPTYAEAM SDHPPTYATV
160 170 180 190
VAVRSTEQPS GALAPDDQRR TQNSGAWRPP RVNSRELYRA QRAARLV
Length:197
Mass (Da):21,184
Last modified:July 1, 1989 - v1
Checksum:i7DC7F15FA7403158
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14112 Genomic DNA. Translation: CAA32292.1.
PIRiB30090. WMBEY6.

Genome annotation databases

KEGGivg:2703428.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14112 Genomic DNA. Translation: CAA32292.1.
PIRiB30090. WMBEY6.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGivg:2703428.

Family and domain databases

InterProiIPR007620. Herpes_UL56.
[Graphical view]
PfamiPF04534. Herpes_UL56. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete DNA sequence of the long unique region in the genome of herpes simplex virus type 1."
    McGeoch D.J., Dalrymple M.A., Davison A.J., Dolan A., Frame M.C., McNab D., Perry L.J., Scott J.E., Taylor P.
    J. Gen. Virol. 69:1531-1574(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The DNA sequences of the long repeat region and adjoining parts of the long unique region in the genome of herpes simplex virus type 1."
    Perry L.J., McGeoch D.J.
    J. Gen. Virol. 69:2831-2846(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  3. "Comparative sequence analysis of the long repeat regions and adjoining parts of the long unique regions in the genomes of herpes simplex viruses types 1 and 2."
    McGeoch D.J., Cunningham C., McIntyre G., Dolan A.
    J. Gen. Virol. 72:3057-3075(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: SEQUENCE REVISION.

Entry informationi

Entry nameiUL56_HHV11
AccessioniPrimary (citable) accession number: P10240
Secondary accession number(s): O09801
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: July 22, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.