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Protein

Tegument protein UL55

Gene

UL55

Organism
Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  1. viral life cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Tegument protein UL55
Gene namesi
ORF Names:UL55
OrganismiHuman herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1)
Taxonomic identifieri10299 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeAlphaherpesvirinaeSimplexvirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
ProteomesiUP000009294: Genome

Subcellular locationi

Virion tegument 1 Publication. Host nucleus matrix By similarity

GO - Cellular componenti

  1. host cell nuclear matrix Source: UniProtKB-SubCell
  2. viral tegument Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Host nucleus, Virion, Virion tegument

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 186186Tegument protein UL55PRO_0000116117Add
BLAST

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR007622. Herpes_UL55.
[Graphical view]
PfamiPF04537. Herpes_UL55. 1 hit.
[Graphical view]
ProDomiPD011159. Herpes_UL55. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P10239-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTATPLTNLF LRAPDITHVA PPYCLNATWQ AETAMHTSKT DSACVAVRSY
60 70 80 90 100
LVRASCETSG TIHCFFFAVY KDTHHTPPLI TELRNFADLV NHPPVLRELE
110 120 130 140 150
DKRGVRLRCA RPFSVGTIKD VSGSGASSAG EYTINGIVYH CHCRYPFSKT
160 170 180
CWMGASAALQ HLRSISSSGM AARAAEHRRV KIKIKA
Length:186
Mass (Da):20,493
Last modified:July 1, 1989 - v1
Checksum:i1A9EAD88C2B54331
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti142 – 1421H → Q in strain: 17 syn+.

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14112 Genomic DNA. Translation: CAA32291.1.
FJ593289 Genomic DNA. Translation: ACM62279.1.
PIRiA30090. WMBEY5.
RefSeqiNP_044658.1. NC_001806.1.

Genome annotation databases

GeneIDi2703427.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14112 Genomic DNA. Translation: CAA32291.1.
FJ593289 Genomic DNA. Translation: ACM62279.1.
PIRiA30090. WMBEY5.
RefSeqiNP_044658.1. NC_001806.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi2703427.

Family and domain databases

InterProiIPR007622. Herpes_UL55.
[Graphical view]
PfamiPF04537. Herpes_UL55. 1 hit.
[Graphical view]
ProDomiPD011159. Herpes_UL55. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequences of the long repeat region and adjoining parts of the long unique region in the genome of herpes simplex virus type 1."
    Perry L.J., McGeoch D.J.
    J. Gen. Virol. 69:2831-2846(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The complete DNA sequence of the long unique region in the genome of herpes simplex virus type 1."
    McGeoch D.J., Dalrymple M.A., Davison A.J., Dolan A., Frame M.C., McNab D., Perry L.J., Scott J.E., Taylor P.
    J. Gen. Virol. 69:1531-1574(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "Herpes simplex virus type 1 bacterial artificial chromosome."
    Cunningham C., Davison A.J.
    Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 17 syn+.
  4. "Comprehensive characterization of extracellular herpes simplex virus type 1 virions."
    Loret S., Guay G., Lippe R.
    J. Virol. 82:8605-8618(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION.
    Strain: F.

Entry informationi

Entry nameiTEG6_HHV11
AccessioniPrimary (citable) accession number: P10239
Secondary accession number(s): B9VQI4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1989
Last sequence update: July 1, 1989
Last modified: January 7, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.