P0DJY2 - POG_ABPVR
Putative protein pog
Acute bee paralysis virus (strain Rothamsted) (ABPV)
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
Names & Taxonomyi
Recommended name:Putative protein pog
|Organismi||Acute bee paralysis virus (strain Rothamsted) (ABPV)|
|Taxonomic identifieri||1217067 [NCBI]|
|Taxonomic lineagei||Viruses › ssRNA positive-strand viruses, no DNA stage › Picornavirales › Dicistroviridae › Aparavirus ›|
|Virus hosti||Apis mellifera (Honeybee) [TaxID: 7460]|
PTM / Processingi
|Feature key||Position(s)||Length||Description||Graphical view||Feature identifier||Actions|
|Chaini||1 – 92||92||Putative protein pog||PRO_0000423159||Add|
Sequence statusi: Complete.
Select the link destinations:
|AF150629 Genomic RNA. No translation available.|
Select the link destinations:
Genomic RNA. No translation available.
3D structure databases
Protocols and materials databases
|Structural Biology Knowledgebase||Search...
Family and domain databases
- "Analysis of the complete genome sequence of acute bee paralysis virus shows that it belongs to the novel group of insect-infecting RNA viruses."
Govan V.A., Leat N., Allsopp M., Davison S.
Virology 277:457-463(2000) [PubMed] [Europe PMC] [Abstract]Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
- "A potentially novel overlapping gene in the genomes of Israeli acute paralysis virus and its relatives."
Sabath N., Price N., Graur D.
Virol. J. 6:144-144(2009) [PubMed] [Europe PMC] [Abstract]Cited for: IDENTIFICATION.Strain: Israeli acute paralysis dicistrovirus.
- "Alternative reading frame selection mediated by a tRNA-like domain of an internal ribosome entry site."
Ren Q., Wang Q.S., Firth A.E., Chan M.M., Gouw J.W., Guarna M.M., Foster L.J., Atkins J.F., Jan E.
Proc. Natl. Acad. Sci. U.S.A. 109:E630-E639(2012) [PubMed] [Europe PMC] [Abstract]Cited for: CHARACTERIZATION.Strain: Israeli acute paralysis dicistrovirus.
|Accessioni||P0DJY2Primary (citable) accession number: P0DJY2|
|Entry statusi||Reviewed (UniProtKB/Swiss-Prot)|
|Annotation program||Viral Protein Annotation Program|
Translated through a Met-tRNA-independent initiatiation on a CCG proline adjacent to the unusual Internal Ribosome Entry Site (IRES) localized upstream the viral structural polyprotein ORF (ORF2).Curated
Keywords - Technical termiComplete proteome, Reference proteome
External DataDasty 3
Similar proteinsiLinks to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
|100%||UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.|
|90%||UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).|
|50%||UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.|