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P0DJY2 (POG_ABPVR) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 2. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Putative protein pog
Alternative name(s):
ORFx protein
OrganismAcute bee paralysis virus (strain Rothamsted) (ABPV) [Reference proteome]
Taxonomic identifier1217067 [NCBI]
Taxonomic lineageVirusesssRNA positive-strand viruses, no DNA stagePicornaviralesDicistroviridaeAparavirus
Virus hostApis mellifera (Honeybee) [TaxID: 7460]

Protein attributes

Sequence length92 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Caution

Translated through a Met-tRNA-independent initiatiation on a CCG proline adjacent to the unusual Internal Ribosome Entry Site (IRES) localized upstream the viral structural polyprotein ORF (ORF2).

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 9292Putative protein pog
PRO_0000423159

Sequences

Sequence LengthMass (Da)Tools
P0DJY2 [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: 6D31A46A1591A828

FASTA9210,901
        10         20         30         40         50         60 
PIKKQILPTY IIRNSRRPLK KTQLKRNKSP PFMMWKLQIG SIPPWLKTLH RLGAWMIRTV 

        70         80         90 
LFSFYNAPYS LTTLRSLLDQ QQMITNPSID MC 

« Hide

References

[1]"Analysis of the complete genome sequence of acute bee paralysis virus shows that it belongs to the novel group of insect-infecting RNA viruses."
Govan V.A., Leat N., Allsopp M., Davison S.
Virology 277:457-463(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]"A potentially novel overlapping gene in the genomes of Israeli acute paralysis virus and its relatives."
Sabath N., Price N., Graur D.
Virol. J. 6:144-144(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION.
Strain: Israeli acute paralysis dicistrovirus.
[3]"Alternative reading frame selection mediated by a tRNA-like domain of an internal ribosome entry site."
Ren Q., Wang Q.S., Firth A.E., Chan M.M., Gouw J.W., Guarna M.M., Foster L.J., Atkins J.F., Jan E.
Proc. Natl. Acad. Sci. U.S.A. 109:E630-E639(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: CHARACTERIZATION.
Strain: Israeli acute paralysis dicistrovirus.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF150629 Genomic RNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry namePOG_ABPVR
AccessionPrimary (citable) accession number: P0DJY2
Entry history
Integrated into UniProtKB/Swiss-Prot: July 24, 2013
Last sequence update: July 24, 2013
Last modified: March 19, 2014
This is version 2 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program