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P0DJX6 (ALT2B_EMCVR) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 2. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length128 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the encephalomyocarditis virus protein 2B* family.

Ontologies

Keywords
   Coding sequence diversityRibosomal frameshifting
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Alternative products

This entry describes 2 isoforms produced by ribosomal frameshifting. [Align] [Select]
Isoform 2B* (identifier: P0DJX6-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Note: Produced by -1 ribosomal frameshifting.
Isoform Genome polyprotein (identifier: Q66765-1)

The sequence of this isoform can be found in the external entry Q66765.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Note: Produced by conventional translation.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 128128Protein 2B*
PRO_0000423153

Sequences

Sequence LengthMass (Da)Tools
Isoform 2B* [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: 485A86DFDE99C710

FASTA12814,449
        10         20         30         40         50         60 
PFMFRPRKQV FPDPRSGSVI NGSNPTAERP CQQSYGISFY GFARCQRGRP KSNEDYKDIK 

        70         80         90        100        110        120 
FSIGCMGKCK RNTKQPRVLE AALEQMCAAD CRDDNSSDAS GPFDSALLRN IDGRRDYKPD 


KSVRRNSS 

« Hide

Isoform Genome polyprotein [UniParc].

See Q66765.

References

[1]"Sequence and structural elements that contribute to efficient encephalomyocarditis virus RNA translation."
Duke G.M., Hoffman M.A., Palmenberg A.C.
J. Virol. 66:1602-1609(1992) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M81861 Genomic RNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameALT2B_EMCVR
AccessionPrimary (citable) accession number: P0DJX6
Entry history
Integrated into UniProtKB/Swiss-Prot: July 24, 2013
Last sequence update: July 24, 2013
Last modified: March 19, 2014
This is version 2 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families