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P0DJX6

- ALT2B_EMCVR

UniProt

P0DJX6 - ALT2B_EMCVR

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Protein

Protein 2B*

Gene
N/A
Organism
Encephalomyocarditis virus (strain Rueckert) (EMCV)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein 2B*
OrganismiEncephalomyocarditis virus (strain Rueckert) (EMCV)
Taxonomic identifieri650129 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stagePicornaviralesPicornaviridaeCardiovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Mus musculus (Mouse) [TaxID: 10090]
Sigmodon hispidus (Hispid cotton rat) [TaxID: 42415]
Sus scrofa (Pig) [TaxID: 9823]
ProteomesiUP000002319: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 128128Protein 2B*PRO_0000423153Add
BLAST

Family & Domainsi

Sequence similaritiesi

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by ribosomal frameshifting. Align

Isoform 2B* (identifier: P0DJX6-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
PFMFRPRKQV FPDPRSGSVI NGSNPTAERP CQQSYGISFY GFARCQRGRP
60 70 80 90 100
KSNEDYKDIK FSIGCMGKCK RNTKQPRVLE AALEQMCAAD CRDDNSSDAS
110 120
GPFDSALLRN IDGRRDYKPD KSVRRNSS

Note: Produced by -1 ribosomal frameshifting.

Length:128
Mass (Da):14,449
Last modified:July 24, 2013 - v1
Checksum:i485A86DFDE99C710
GO
Isoform Genome polyprotein (identifier: Q66765-1) [UniParc]FASTAAdd to Basket

The sequence of this isoform can be found in the external entry Q66765.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.

Note: Produced by conventional translation.

Length:2,292
Mass (Da):255,459
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M81861 Genomic RNA. No translation available.

Keywords - Coding sequence diversityi

Ribosomal frameshifting

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M81861 Genomic RNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "Sequence and structural elements that contribute to efficient encephalomyocarditis virus RNA translation."
    Duke G.M., Hoffman M.A., Palmenberg A.C.
    J. Virol. 66:1602-1609(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiALT2B_EMCVR
AccessioniPrimary (citable) accession number: P0DJX6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 24, 2013
Last sequence update: July 24, 2013
Last modified: October 1, 2014
This is version 3 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3