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Protein

Small integral membrane protein 13

Gene

SMIM13

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Small integral membrane protein 13
Gene namesi
Name:SMIM13
Synonyms:C6orf228
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiHostDB:ENSG00000224531.5
HGNCiHGNC:27356 SMIM13
neXtProtiNX_P0DJ93

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei10 – 30HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000224531

Polymorphism and mutation databases

BioMutaiSMIM13
DMDMi363579843

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004140601 – 91Small integral membrane protein 13Add BLAST91

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei58PhosphoserineBy similarity1
Modified residuei60PhosphoserineBy similarity1
Modified residuei62PhosphothreonineBy similarity1
Modified residuei69PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiP0DJ93
MaxQBiP0DJ93
PaxDbiP0DJ93
PeptideAtlasiP0DJ93
PRIDEiP0DJ93
ProteomicsDBi52537
TopDownProteomicsiP0DJ93

PTM databases

iPTMnetiP0DJ93
PhosphoSitePlusiP0DJ93

Expressioni

Gene expression databases

BgeeiENSG00000224531
GenevisibleiP0DJ93 HS

Organism-specific databases

HPAiHPA065706

Interactioni

Protein-protein interaction databases

BioGridi128747, 1 interactor

Structurei

3D structure databases

ProteinModelPortaliP0DJ93
SMRiP0DJ93
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SMIM13 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410J4X9 Eukaryota
ENOG410YT20 LUCA
GeneTreeiENSGT00560000078630
InParanoidiP0DJ93
OMAiMWHNVGL
OrthoDBiEOG091G16CW

Family and domain databases

InterProiView protein in InterPro
IPR031851 DUF4750
PANTHERiPTHR36877 PTHR36877, 1 hit
PfamiView protein in Pfam
PF15938 DUF4750, 1 hit

Sequencei

Sequence statusi: Complete.

P0DJ93-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWHSVGLTLL VFVATLLIVL LLMVCGWYFV WHLFLSKFKF LRELVGDTGS
60 70 80 90
QEGDHEPSGS ETEEDTSSSP HRIRSARQRR APADEGHRPL T
Length:91
Mass (Da):10,351
Last modified:December 14, 2011 - v1
Checksum:i9394704F780C22A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL136139 Genomic DNA No translation available.
BC032356 mRNA No translation available.
CCDSiCCDS56396.1
RefSeqiNP_001129047.1, NM_001135575.1
UniGeneiHs.656600

Genome annotation databases

EnsembliENST00000376935; ENSP00000452219; ENSG00000224531
ENST00000416247; ENSP00000451866; ENSG00000224531
GeneIDi221710
KEGGihsa:221710
UCSCiuc011dio.3 human

Similar proteinsi

Entry informationi

Entry nameiSIM13_HUMAN
AccessioniPrimary (citable) accession number: P0DJ93
Secondary accession number(s): G3V581
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 14, 2011
Last sequence update: December 14, 2011
Last modified: June 20, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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