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Protein

Protein PET100 homolog, mitochondrial

Gene

PET100

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein PET100 homolog, mitochondrial
Gene namesi
Name:PET100
Synonyms:C19orf79
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 19

Organism-specific databases

HGNCiHGNC:40038. PET100.

Subcellular locationi

Membrane Curated; Single-pass membrane protein Curated. Mitochondrion By similarity
Note: Localizes to a membrane-bound organelle.1 Publication

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei7 – 2418HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. mitochondrion Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Membrane, Mitochondrion

Pathology & Biotechi

Organism-specific databases

Orphaneti254905. Isolated cytochrome C oxidase deficiency.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 73Protein PET100 homolog, mitochondrialPRO_0000413099
Transit peptidei1 – ?Mitochondrion

Proteomic databases

MaxQBiP0DJ07.
PRIDEiP0DJ07.

Expressioni

Gene expression databases

BgeeiP0DJ07.
ExpressionAtlasiP0DJ07. baseline.

Interactioni

Subunit structurei

Interacts with COX7A2.1 Publication

Protein-protein interaction databases

BioGridi935494. 1 interaction.

Family & Domainsi

Sequence similaritiesi

Belongs to the PET100 family.Curated

Keywords - Domaini

Transit peptide, Transmembrane, Transmembrane helix

Phylogenomic databases

GeneTreeiENSGT00390000016884.
InParanoidiP0DJ07.
KOiK18186.
OMAiAEWFEDY.
OrthoDBiEOG7GBG0Q.
PhylomeDBiP0DJ07.
TreeFamiTF314727.

Family and domain databases

InterProiIPR018625. DUF2346.
[Graphical view]
PfamiPF09803. DUF2346. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0DJ07-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVKLEIFRM IIYLTFPVAM FWVSNQAEWF EDDVIQRKRE LWPPEKLQEI
60 70
EEFKERLRKR REEKLLRDAQ QNS
Length:73
Mass (Da):9,114
Last modified:October 19, 2011 - v1
Checksum:iCE20E13A4155616C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC008763 Genomic DNA. No translation available.
BC150496 mRNA. No translation available.
CCDSiCCDS54208.1.
RefSeqiNP_001164626.1. NM_001171155.1.
UniGeneiHs.728837.

Genome annotation databases

EnsembliENST00000594797; ENSP00000470539; ENSG00000229833.
GeneIDi100131801.
KEGGihsa:100131801.
UCSCiuc010dvi.2. human.

Polymorphism databases

DMDMi353558869.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC008763 Genomic DNA. No translation available.
BC150496 mRNA. No translation available.
CCDSiCCDS54208.1.
RefSeqiNP_001164626.1. NM_001171155.1.
UniGeneiHs.728837.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi935494. 1 interaction.

Polymorphism databases

DMDMi353558869.

Proteomic databases

MaxQBiP0DJ07.
PRIDEiP0DJ07.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000594797; ENSP00000470539; ENSG00000229833.
GeneIDi100131801.
KEGGihsa:100131801.
UCSCiuc010dvi.2. human.

Organism-specific databases

CTDi100131801.
GeneCardsiGC19P007724.
HGNCiHGNC:40038. PET100.
MIMi614770. gene.
neXtProtiNX_P0DJ07.
Orphaneti254905. Isolated cytochrome C oxidase deficiency.
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00390000016884.
InParanoidiP0DJ07.
KOiK18186.
OMAiAEWFEDY.
OrthoDBiEOG7GBG0Q.
PhylomeDBiP0DJ07.
TreeFamiTF314727.

Miscellaneous databases

NextBioi20773576.
PROiP0DJ07.
SOURCEiSearch...

Gene expression databases

BgeeiP0DJ07.
ExpressionAtlasiP0DJ07. baseline.

Family and domain databases

InterProiIPR018625. DUF2346.
[Graphical view]
PfamiPF09803. DUF2346. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and biology of human chromosome 19."
    Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V.
    , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
    Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  3. "Iterative orthology prediction uncovers new mitochondrial proteins and identifies C12orf62 as the human ortholog of COX14, a protein involved in the assembly of cytochrome c oxidase."
    Szklarczyk R., Wanschers B.F., Cuypers T.D., Esseling J.J., Riemersma M., van den Brand M.A., Gloerich J., Lasonder E., van den Heuvel L.P., Nijtmans L.G., Huynen M.A.
    Genome Biol. 13:RESEARCH0012.1-RESEARCH0012.14(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH COX7A2, SUBCELLULAR LOCATION.

Entry informationi

Entry nameiPT100_HUMAN
AccessioniPrimary (citable) accession number: P0DJ07
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 7, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.