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Protein

Small integral membrane protein 6

Gene

SMIM6

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Small integral membrane protein 6
Gene namesi
Name:SMIM6
Synonyms:C17orf110
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 17

Organism-specific databases

EuPathDBiHostDB:ENSG00000259120.2.
HGNCiHGNC:40032. SMIM6.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei25 – 45HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000259120.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004122251 – 62Small integral membrane protein 6Add BLAST62

Proteomic databases

PaxDbiP0DI80.
PeptideAtlasiP0DI80.
PRIDEiP0DI80.

Expressioni

Gene expression databases

BgeeiENSG00000259120.
GenevisibleiP0DI80. HS.

Organism-specific databases

HPAiHPA065721.

Structurei

3D structure databases

ProteinModelPortaliP0DI80.
SMRiP0DI80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410JMQX. Eukaryota.
ENOG4111300. LUCA.
GeneTreeiENSGT00520000061333.
InParanoidiP0DI80.
OMAiFWQNPWD.
OrthoDBiEOG091G16N2.
PhylomeDBiP0DI80.

Sequencei

Sequence statusi: Complete.

P0DI80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDQLVFKETI WNDAFWQNPW DQGGLAVIIL FITAVLLLIL FAIVFGLLTS
60
TENTQCEAGE EE
Length:62
Mass (Da):7,017
Last modified:September 21, 2011 - v1
Checksum:iCA605EB69C41AD08
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK131023 mRNA. No translation available.
AC087749 Genomic DNA. No translation available.
CCDSiCCDS54166.1.
RefSeqiNP_001156469.1. NM_001162997.1.
XP_005256960.1. XM_005256903.4.
UniGeneiHs.662541.

Genome annotation databases

EnsembliENST00000556126; ENSP00000450581; ENSG00000259120.
ENST00000579469; ENSP00000463361; ENSG00000259120.
GeneIDi100130933.
KEGGihsa:100130933.
UCSCiuc002joy.4. human.

Similar proteinsi

Entry informationi

Entry nameiSMIM6_HUMAN
AccessioniPrimary (citable) accession number: P0DI80
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 21, 2011
Last sequence update: September 21, 2011
Last modified: September 27, 2017
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM