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Protein

UPF0479 membrane protein YER190C-B

Gene

YER190C-B

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-30396-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0479 membrane protein YER190C-B
Gene namesi
Ordered Locus Names:YER190C-B
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311 Componenti: Chromosome V

Organism-specific databases

EuPathDBiFungiDB:YER190C-B.
SGDiS000028627. YER190C-B.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei39 – 5921HelicalSequence AnalysisAdd
BLAST
Transmembranei136 – 15621HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 160160UPF0479 membrane protein YER190C-BPRO_0000277622Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP0CX94.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi103 – 1064Poly-Ser

Sequence similaritiesi

Belongs to the UPF0479 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000000847.
OrthoDBiEOG7BKD6G.

Sequencei

Sequence statusi: Complete.

P0CX94-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFPALF
60 70 80 90 100
FVPVQKVLQH LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN
110 120 130 140 150
CFSSSSNGQV PSIISLYLRV DLSPFYAKIF QISYRVPMIW LDVFQVFFVF
160
LVISQHSLHS
Length:160
Mass (Da):18,602
Last modified:June 28, 2011 - v1
Checksum:i80D7192EAAB3D083
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U34775 Genomic DNA. No translation available.
U18922 Genomic DNA. No translation available.
AF479992 Genomic DNA. Translation: AAL79305.1.
BK006939 Genomic DNA. Translation: DAA07854.1.
RefSeqiNP_001073292.1. NM_001184590.1.

Genome annotation databases

EnsemblFungiiYER190C-B; YER190C-B; YER190C-B.
YGR296C-B; YGR296C-B; YGR296C-B.
YPL283W-B; YPL283W-B; YPL283W-B.
YPR204C-A; YPR204C-A; YPR204C-A.
GeneIDi4594642.
KEGGisce:YER190C-B.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U34775 Genomic DNA. No translation available.
U18922 Genomic DNA. No translation available.
AF479992 Genomic DNA. Translation: AAL79305.1.
BK006939 Genomic DNA. Translation: DAA07854.1.
RefSeqiNP_001073292.1. NM_001184590.1.

3D structure databases

ProteinModelPortaliP0CX94.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYER190C-B; YER190C-B; YER190C-B.
YGR296C-B; YGR296C-B; YGR296C-B.
YPL283W-B; YPL283W-B; YPL283W-B.
YPR204C-A; YPR204C-A; YPR204C-A.
GeneIDi4594642.
KEGGisce:YER190C-B.

Organism-specific databases

EuPathDBiFungiDB:YER190C-B.
SGDiS000028627. YER190C-B.

Phylogenomic databases

HOGENOMiHOG000000847.
OrthoDBiEOG7BKD6G.

Enzyme and pathway databases

BioCyciYEAST:G3O-30396-MONOMER.

Miscellaneous databases

NextBioi983917.
PROiP0CX94.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiYE190_YEAST
AccessioniPrimary (citable) accession number: P0CX94
Secondary accession number(s): D3DMA0, Q8TFA4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 29, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome V
    Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.