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P0CX94 (YE190_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
UPF0479 membrane protein YER190C-B
Gene names
Ordered Locus Names:YER190C-B
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length160 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the UPF0479 family.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 160160UPF0479 membrane protein YER190C-B
PRO_0000277622

Regions

Transmembrane39 – 5921Helical; Potential
Transmembrane136 – 15621Helical; Potential
Compositional bias103 – 1064Poly-Ser

Sequences

Sequence LengthMass (Da)Tools
P0CX94 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 80D7192EAAB3D083

FASTA16018,602
        10         20         30         40         50         60 
MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFPALF FVPVQKVLQH 

        70         80         90        100        110        120 
LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN CFSSSSNGQV PSIISLYLRV 

       130        140        150        160 
DLSPFYAKIF QISYRVPMIW LDVFQVFFVF LVISQHSLHS 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome V."
Dietrich F.S., Mulligan J.T., Hennessy K.M., Yelton M.A., Allen E., Araujo R., Aviles E., Berno A., Brennan T., Carpenter J., Chen E., Cherry J.M., Chung E., Duncan M., Guzman E., Hartzell G., Hunicke-Smith S., Hyman R.W. expand/collapse author list , Kayser A., Komp C., Lashkari D., Lew H., Lin D., Mosedale D., Nakahara K., Namath A., Norgren R., Oefner P., Oh C., Petel F.X., Roberts D., Sehl P., Schramm S., Shogren T., Smith V., Taylor P., Wei Y., Botstein D., Davis R.W.
Nature 387:78-81(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"An integrated approach for finding overlooked genes in yeast."
Kumar A., Harrison P.M., Cheung K.-H., Lan N., Echols N., Bertone P., Miller P., Gerstein M.B., Snyder M.
Nat. Biotechnol. 20:58-63(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U34775 Genomic DNA. No translation available.
U18922 Genomic DNA. No translation available.
AF479992 Genomic DNA. Translation: AAL79305.1.
BK006939 Genomic DNA. Translation: DAA07854.1.
RefSeqNP_001073292.1. NM_001184590.1.

3D structure databases

ProteinModelPortalP0CX94.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYER190C-B; YER190C-B; YER190C-B.
YGR296C-B; YGR296C-B; YGR296C-B.
YPL283W-B; YPL283W-B; YPL283W-B.
YPR204C-A; YPR204C-A; YPR204C-A.
GeneID4594642.
KEGGsce:YER190C-B.

Organism-specific databases

SGDS000028627. YER190C-B.

Phylogenomic databases

HOGENOMHOG000000847.
OrthoDBEOG7BKD6G.

Enzyme and pathway databases

BioCycYEAST:G3O-30396-MONOMER.

Family and domain databases

ProtoNetSearch...

Other

NextBio983917.

Entry information

Entry nameYE190_YEAST
AccessionPrimary (citable) accession number: P0CX94
Secondary accession number(s): D3DMA0, Q8TFA4
Entry history
Integrated into UniProtKB/Swiss-Prot: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome V

Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families