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Protein

40S ribosomal protein S30-A

Gene

RPS30A

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: SGD

GO - Biological processi

  • cytoplasmic translation Source: SGD
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciYEAST:G3O-32382-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S30-A
Gene namesi
Name:RPS30A
Ordered Locus Names:YLR287C-A
ORF Names:L8003.23, YLR287BC
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XII

Organism-specific databases

SGDiS000004278. RPS30A.

Subcellular locationi

GO - Cellular componenti

  • cytoplasmic stress granule Source: SGD
  • cytosolic small ribosomal subunit Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemoved1 Publication
Chaini2 – 636240S ribosomal protein S30-APRO_0000174009Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei16 – 161PhosphoserineCombined sources
Modified residuei48 – 481PhosphothreonineCombined sources

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiP0CX33.
TopDownProteomicsiP0CX33.

PTM databases

iPTMnetiP0CX33.

Expressioni

Gene expression databases

ExpressionAtlasiP0CX33. differential.

Interactioni

Subunit structurei

Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains 32 different proteins (encoded by 56 genes) and 1 molecule of RNA (18S). The 60S subunit contains 46 different proteins (encoded by 81 genes) and 3 molecules of RNA (25S, 5.8S and 5S).1 Publication

Protein-protein interaction databases

BioGridi31553. 66 interactions.
34577. 53 interactions.

Structurei

Secondary structure

1
63
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Turni9 – 124Combined sources
Helixi13 – 175Combined sources
Helixi33 – 4311Combined sources
Turni44 – 463Combined sources
Beta strandi51 – 533Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J16electron microscopy-E1-63[»]
3J6Xelectron microscopy6.10301-63[»]
3J6Yelectron microscopy6.10301-63[»]
3J77electron microscopy6.20301-63[»]
3J78electron microscopy6.30301-63[»]
3V88X-ray3.00e1-63[»]
4U3MX-ray3.00E02-61[»]
e02-63[»]
4U3NX-ray3.20E02-61[»]
e02-63[»]
4U3UX-ray2.90E02-61[»]
e02-63[»]
4U4NX-ray3.10E02-61[»]
e02-63[»]
4U4OX-ray3.60E02-61[»]
e02-63[»]
4U4QX-ray3.00E02-61[»]
e02-63[»]
4U4RX-ray2.80E02-61[»]
e02-63[»]
4U4UX-ray3.00E02-61[»]
e02-63[»]
4U4YX-ray3.20E02-61[»]
e02-63[»]
4U4ZX-ray3.10E02-61[»]
e02-63[»]
4U50X-ray3.20E02-61[»]
e02-63[»]
4U51X-ray3.20E02-61[»]
e02-63[»]
4U52X-ray3.00E0/e02-61[»]
4U53X-ray3.30E02-61[»]
e02-63[»]
4U55X-ray3.20E02-61[»]
e02-63[»]
4U56X-ray3.45E02-61[»]
e02-63[»]
4U6FX-ray3.10E02-61[»]
e02-63[»]
4V6Ielectron microscopy8.80AZ1-63[»]
4V88X-ray3.00Ae/Ce1-63[»]
4V8Yelectron microscopy4.30A41-63[»]
4V8Zelectron microscopy6.60A41-63[»]
4V92electron microscopy3.70e7-61[»]
5DC3X-ray3.25E0/e02-63[»]
5FCIX-ray3.40E0/e02-63[»]
5FCJX-ray3.10E0/e02-63[»]
5I4LX-ray3.10E0/e02-63[»]
ProteinModelPortaliP0CX33.
SMRiP0CX33. Positions 2-61.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S30e family.Curated

Phylogenomic databases

InParanoidiP0CX33.
KOiK02983.
OrthoDBiEOG092C5YU3.

Family and domain databases

InterProiIPR006846. Ribosomal_S30.
[Graphical view]
PfamiPF04758. Ribosomal_S30. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0CX33-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKVHGSLAR AGKVKSQTPK VEKTEKPKKP KGRAYKRLLY TRRFVNVTLV
60
NGKRRMNPGP SVQ
Length:63
Mass (Da):7,118
Last modified:June 28, 2011 - v1
Checksum:i658C4C1D8D9F88CB
GO

Mass spectrometryi

Molecular mass is 6987±3.4 Da from positions 2 - 63. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U48700 Genomic DNA. Translation: AAC49317.1.
U48699 mRNA. Translation: AAC49316.1.
U17243 Genomic DNA. Translation: AAB67333.1.
BK006945 Genomic DNA. Translation: DAA09599.1.
PIRiS67074.
RefSeqiNP_013390.1. NM_001182175.1.
NP_014825.3. NM_001183601.3.

Genome annotation databases

EnsemblFungiiYLR287C-A; YLR287C-A; YLR287C-A.
YOR182C; YOR182C; YOR182C.
GeneIDi850994.
854354.
KEGGisce:YLR287C-A.
sce:YOR182C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U48700 Genomic DNA. Translation: AAC49317.1.
U48699 mRNA. Translation: AAC49316.1.
U17243 Genomic DNA. Translation: AAB67333.1.
BK006945 Genomic DNA. Translation: DAA09599.1.
PIRiS67074.
RefSeqiNP_013390.1. NM_001182175.1.
NP_014825.3. NM_001183601.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J16electron microscopy-E1-63[»]
3J6Xelectron microscopy6.10301-63[»]
3J6Yelectron microscopy6.10301-63[»]
3J77electron microscopy6.20301-63[»]
3J78electron microscopy6.30301-63[»]
3V88X-ray3.00e1-63[»]
4U3MX-ray3.00E02-61[»]
e02-63[»]
4U3NX-ray3.20E02-61[»]
e02-63[»]
4U3UX-ray2.90E02-61[»]
e02-63[»]
4U4NX-ray3.10E02-61[»]
e02-63[»]
4U4OX-ray3.60E02-61[»]
e02-63[»]
4U4QX-ray3.00E02-61[»]
e02-63[»]
4U4RX-ray2.80E02-61[»]
e02-63[»]
4U4UX-ray3.00E02-61[»]
e02-63[»]
4U4YX-ray3.20E02-61[»]
e02-63[»]
4U4ZX-ray3.10E02-61[»]
e02-63[»]
4U50X-ray3.20E02-61[»]
e02-63[»]
4U51X-ray3.20E02-61[»]
e02-63[»]
4U52X-ray3.00E0/e02-61[»]
4U53X-ray3.30E02-61[»]
e02-63[»]
4U55X-ray3.20E02-61[»]
e02-63[»]
4U56X-ray3.45E02-61[»]
e02-63[»]
4U6FX-ray3.10E02-61[»]
e02-63[»]
4V6Ielectron microscopy8.80AZ1-63[»]
4V88X-ray3.00Ae/Ce1-63[»]
4V8Yelectron microscopy4.30A41-63[»]
4V8Zelectron microscopy6.60A41-63[»]
4V92electron microscopy3.70e7-61[»]
5DC3X-ray3.25E0/e02-63[»]
5FCIX-ray3.40E0/e02-63[»]
5FCJX-ray3.10E0/e02-63[»]
5I4LX-ray3.10E0/e02-63[»]
ProteinModelPortaliP0CX33.
SMRiP0CX33. Positions 2-61.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi31553. 66 interactions.
34577. 53 interactions.

PTM databases

iPTMnetiP0CX33.

Proteomic databases

MaxQBiP0CX33.
TopDownProteomicsiP0CX33.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYLR287C-A; YLR287C-A; YLR287C-A.
YOR182C; YOR182C; YOR182C.
GeneIDi850994.
854354.
KEGGisce:YLR287C-A.
sce:YOR182C.

Organism-specific databases

SGDiS000004278. RPS30A.

Phylogenomic databases

InParanoidiP0CX33.
KOiK02983.
OrthoDBiEOG092C5YU3.

Enzyme and pathway databases

BioCyciYEAST:G3O-32382-MONOMER.

Miscellaneous databases

PROiP0CX33.

Gene expression databases

ExpressionAtlasiP0CX33. differential.

Family and domain databases

InterProiIPR006846. Ribosomal_S30.
[Graphical view]
PfamiPF04758. Ribosomal_S30. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS30A_YEAST
AccessioniPrimary (citable) accession number: P0CX33
Secondary accession number(s): D6VYT3, Q12087
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 28, 2011
Last sequence update: June 28, 2011
Last modified: September 7, 2016
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 37600 molecules/cell in log phase SD medium.1 Publication
There are 2 genes for S30 in yeast.

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families
  4. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  5. Yeast chromosome XII
    Yeast (Saccharomyces cerevisiae) chromosome XII: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.