P0CW20 (LIM3L_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
LIM and senescent cell antigen-like-containing domain protein 3-like

Gene names

Name:

LIMS3L

Organism

Homo sapiens (Human) [Reference proteome]

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	117 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 LIM zinc-binding domain.

Ontologies

Keywords
Domain	LIM domain
Ligand	Metal-binding Zinc
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 117	117	LIM and senescent cell antigen-like-containing domain protein 3-like		PRO_0000409553
Regions
	Domain	70 – 117	48	LIM zinc-binding

Sequences

	Sequence		Length	Mass (Da)
	P0CW20 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: F260926C06DA51CE	FASTA	117	13,251
	10 20 30 40 50 60 MAFSGRARPC IIPENEEIPR AALNTVHEAN GTEDERAVSK LQRRHSDVKV YKEFCDFYAK 70 80 90 100 110 FNMANALASA TCERCKGGFA PAETIVNSNG ELYHEQCFVC AQCFQQFPEG LFYEERT

References

[1]

"Generation and annotation of the DNA sequences of human chromosomes 2 and 4." Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. , Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K., McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C., Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S., Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H., Wilson R.K. Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC108938 Genomic DNA. Translation: AAY24131.1. AC112229 Genomic DNA. No translation available.
IPI	IPI00917369.
RefSeq	NP_001192217.1. NM_001205288.1. NP_277049.1. NM_033514.4.
UniGene	Hs.733289. Hs.735995.
3D structure databases
ProteinModelPortal	P0CW20.
ModBase	Search...
Protein-protein interaction databases
STRING	9606.ENSP00000387795.
Proteomic databases
PRIDE	P0CW20.
Protocols and materials databases
DNASU	96626.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000413601; ENSP00000404432; ENSG00000256671.
GeneID	100288695. 96626.
KEGG	hsa:100288695. hsa:96626.
UCSC	uc002tff.3. human.
Organism-specific databases
CTD	100288695. 96626.
GeneCards	GC02M111204.
HGNC	HGNC:39941. LIMS3L.
neXtProt	NX_P0CW20.
GenAtlas	Search...
Phylogenomic databases
HOGENOM	HOG000070043.
OrthoDB	EOG4NP73S.
PhylomeDB	P0CW20.
Gene expression databases
ArrayExpress	P0CW20.
Bgee	P0CW20.
Family and domain databases
Gene3D	2.10.110.10. 1 hit.
InterPro	IPR001781. Znf_LIM. [Graphical view]
Pfam	PF00412. LIM. 1 hit. [Graphical view]
SMART	SM00132. LIM. 1 hit. [Graphical view]
PROSITE	PS00478. LIM_DOMAIN_1. 1 hit. PS50023. LIM_DOMAIN_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20778441.

Entry information

Entry name

LIM3L_HUMAN

Accession

Primary (citable) accession number: P0CW20
Secondary accession number(s): C9K0W2

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.