Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Decorin-binding protein B

Gene

dbpB

Organism
Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Binds to decorin which may mediate the adherence of B.burgdorferi to collagen fibers in skin and other tissues.By similarity

Enzyme and pathway databases

BioCyciBBUR224326:G9SO-885-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Decorin-binding protein B
Gene namesi
Name:dbpB
Ordered Locus Names:BB_A25
Encoded oniPlasmid lp540 Publication
OrganismiBorrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
Taxonomic identifieri224326 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesBorreliaceaeBorreliaBorrelia burgdorferi group
ProteomesiUP000001807 Componenti: Plasmid lp54

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 187167Decorin-binding protein BPRO_0000021075Add
BLAST

Structurei

Secondary structure

1
187
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Turni27 – 315Combined sources
Helixi34 – 5320Combined sources
Turni70 – 745Combined sources
Helixi75 – 10228Combined sources
Turni103 – 1053Combined sources
Helixi108 – 12013Combined sources
Turni121 – 1233Combined sources
Helixi124 – 1285Combined sources
Helixi134 – 14310Combined sources
Helixi150 – 16718Combined sources
Helixi168 – 1714Combined sources
Beta strandi174 – 1785Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2MVGNMR-A22-187[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the decorin-binding protein family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

OMAiISEEAKC.
OrthoDBiEOG6M3PG7.

Family and domain databases

InterProiIPR003332. Decorin-bd.
[Graphical view]
PfamiPF02352. Decorin_bind. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0CL68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIGKLNSIV IALFFKLLVA CSIGLVERTN AALESSSKDL KNKILKIKKE
60 70 80 90 100
ATGKGVLFEA FTGLKTGSKV TSGGLALREA KVQAIVETGK FLKIIEEEAL
110 120 130 140 150
KLKETGNSGQ FLAMFDLMLE VVESLEDVGI IGLKARVLEE SKNNPINTAE
160 170 180
RLLAAKAQIE NQLKVVKEKQ NIENGGEKKN NKSKKKK
Length:187
Mass (Da):20,398
Last modified:April 5, 2011 - v1
Checksum:i7AC8CCF8C690E526
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000790 Genomic DNA. Translation: AAC66244.1.
PIRiA70210.
RefSeqiNP_045698.1. NC_001857.2.
WP_010890381.1. NC_001857.2.

Genome annotation databases

EnsemblBacteriaiAAC66244; AAC66244; BB_A25.
GeneIDi1194341.
KEGGibbu:BB_A25.
PATRICi20558974. VBIBorBur75917_1542.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000790 Genomic DNA. Translation: AAC66244.1.
PIRiA70210.
RefSeqiNP_045698.1. NC_001857.2.
WP_010890381.1. NC_001857.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2MVGNMR-A22-187[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC66244; AAC66244; BB_A25.
GeneIDi1194341.
KEGGibbu:BB_A25.
PATRICi20558974. VBIBorBur75917_1542.

Phylogenomic databases

OMAiISEEAKC.
OrthoDBiEOG6M3PG7.

Enzyme and pathway databases

BioCyciBBUR224326:G9SO-885-MONOMER.

Family and domain databases

InterProiIPR003332. Decorin-bd.
[Graphical view]
PfamiPF02352. Decorin_bind. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35210 / B31 / CIP 102532 / DSM 4680.

Entry informationi

Entry nameiDBPB_BORBU
AccessioniPrimary (citable) accession number: P0CL68
Secondary accession number(s): O50918, O52611
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 5, 2011
Last sequence update: April 5, 2011
Last modified: November 11, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Plasmid, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.