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Protein

Putative UPF0479 protein YIL177W-A

Gene

YIL177W-A

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative UPF0479 protein YIL177W-A
Gene namesi
Ordered Locus Names:YIL177W-A
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311 Componenti: Chromosome IX

Organism-specific databases

SGDiS000028658. YIL177W-A.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei39 – 5921HelicalSequence AnalysisAdd
BLAST
Transmembranei136 – 15621HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 160160Putative UPF0479 protein YIL177W-APRO_0000299787Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP0CL41.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi103 – 1064Poly-Ser

Sequence similaritiesi

Belongs to the UPF0479 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

OrthoDBiEOG7B322J.

Sequencei

Sequence statusi: Complete.

P0CL41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMPAKLQLDV LRTLQSSARH GTQTLKNSTF LERFHNNRIV FCLPFFLALF
60 70 80 90 100
FVPVQKVLQH LCLRFTQVAP YFKIQLFDLP SRHAENLAPL LASCRIQYTN
110 120 130 140 150
CFSSSSNGQV PSIISLYLRV DLSPFYAKIF QISYRVPMIW LDVFQVFFVF
160
LVISQHSLHS
Length:160
Mass (Da):18,605
Last modified:March 8, 2011 - v1
Checksum:i02CE793158FE3595
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46921 Genomic DNA. No translation available.
Z48148 Genomic DNA. No translation available.
AF480000 Genomic DNA. Translation: AAL79313.1.
BK006942 Genomic DNA. No translation available.

Genome annotation databases

EnsemblFungiiYIL177W-A; YIL177W-A; YIL177W-A.
YJL225W-A; YJL225W-A; YJL225W-A.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46921 Genomic DNA. No translation available.
Z48148 Genomic DNA. No translation available.
AF480000 Genomic DNA. Translation: AAL79313.1.
BK006942 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliP0CL41.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYIL177W-A; YIL177W-A; YIL177W-A.
YJL225W-A; YJL225W-A; YJL225W-A.

Organism-specific databases

SGDiS000028658. YIL177W-A.

Phylogenomic databases

OrthoDBiEOG7B322J.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiYJ255_YEAST
AccessioniPrimary (citable) accession number: P0CL41
Secondary accession number(s): Q8TFD1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 8, 2011
Last sequence update: March 8, 2011
Last modified: January 7, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Product of a dubious gene prediction. Completely overlaps YIL177C.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome IX
    Yeast (Saccharomyces cerevisiae) chromosome IX: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.