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Protein

Putative UPF0479 protein YLR466C-A

Gene

YLR466C-A

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative UPF0479 protein YLR466C-A
Gene namesi
Ordered Locus Names:YLR466C-A
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XII

Organism-specific databases

SGDiS000028685. YLR466C-A.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei39 – 59HelicalSequence analysisAdd BLAST21
Transmembranei136 – 156HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004060121 – 160Putative UPF0479 protein YLR466C-AAdd BLAST160

Structurei

3D structure databases

ProteinModelPortaliP0CL38.
SMRiP0CL38.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi103 – 106Poly-Ser4

Sequence similaritiesi

Belongs to the UPF0479 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

OrthoDBiEOG092C5CKX.

Sequencei

Sequence statusi: Complete.

P0CL38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFPALF
60 70 80 90 100
LVPVQKVLQH LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN
110 120 130 140 150
CFSSSSNGQV PSIISLYLRV DLSPFYAKIF QISYRVPMIW LDVFQVFFVF
160
LVISQHSLHS
Length:160
Mass (Da):18,568
Last modified:March 8, 2011 - v1
Checksum:iBBBAAFF871DBF009
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22383 Genomic DNA. No translation available.
AF480010 Genomic DNA. Translation: AAL79323.1.
BK006945 Genomic DNA. No translation available.

Genome annotation databases

EnsemblFungiiYLR466C-A; YLR466C-A; YLR466C-A.
YLR467C-A; YLR467C-A; YLR467C-A.
YOR396C-A; YOR396C-A; YOR396C-A.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22383 Genomic DNA. No translation available.
AF480010 Genomic DNA. Translation: AAL79323.1.
BK006945 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliP0CL38.
SMRiP0CL38.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYLR466C-A; YLR466C-A; YLR466C-A.
YLR467C-A; YLR467C-A; YLR467C-A.
YOR396C-A; YOR396C-A; YOR396C-A.

Organism-specific databases

SGDiS000028685. YLR466C-A.

Phylogenomic databases

OrthoDBiEOG092C5CKX.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYL66C_YEAST
AccessioniPrimary (citable) accession number: P0CL38
Secondary accession number(s): Q8TF92, Q8TGK3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 8, 2011
Last sequence update: March 8, 2011
Last modified: November 2, 2016
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Product of a dubious gene prediction. Completely overlaps YRF1-4.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome XII
    Yeast (Saccharomyces cerevisiae) chromosome XII: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.