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P0CL38

- YL66C_YEAST

UniProt

P0CL38 - YL66C_YEAST

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Protein

Putative UPF0479 protein YLR466C-A

Gene

YLR466C-A

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative UPF0479 protein YLR466C-A
Gene namesi
Ordered Locus Names:YLR466C-A
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome XII

Organism-specific databases

SGDiS000028685. YLR466C-A.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei39 – 5921HelicalSequence AnalysisAdd
BLAST
Transmembranei136 – 15621HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 160160Putative UPF0479 protein YLR466C-APRO_0000406012Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP0CL38.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi103 – 1064Poly-Ser

Sequence similaritiesi

Belongs to the UPF0479 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

OrthoDBiEOG7BKD6G.

Sequencei

Sequence statusi: Complete.

P0CL38-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFPALF
60 70 80 90 100
LVPVQKVLQH LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN
110 120 130 140 150
CFSSSSNGQV PSIISLYLRV DLSPFYAKIF QISYRVPMIW LDVFQVFFVF
160
LVISQHSLHS
Length:160
Mass (Da):18,568
Last modified:March 8, 2011 - v1
Checksum:iBBBAAFF871DBF009
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22383 Genomic DNA. No translation available.
AF480010 Genomic DNA. Translation: AAL79323.1.
BK006945 Genomic DNA. No translation available.

Genome annotation databases

EnsemblFungiiYLR466C-A; YLR466C-A; YLR466C-A.
YLR467C-A; YLR467C-A; YLR467C-A.
YOR396C-A; YOR396C-A; YOR396C-A.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22383 Genomic DNA. No translation available.
AF480010 Genomic DNA. Translation: AAL79323.1 .
BK006945 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali P0CL38.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YLR466C-A ; YLR466C-A ; YLR466C-A .
YLR467C-A ; YLR467C-A ; YLR467C-A .
YOR396C-A ; YOR396C-A ; YOR396C-A .

Organism-specific databases

SGDi S000028685. YLR466C-A.

Phylogenomic databases

OrthoDBi EOG7BKD6G.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XII."
    Johnston M., Hillier L.W., Riles L., Albermann K., Andre B., Ansorge W., Benes V., Brueckner M., Delius H., Dubois E., Duesterhoeft A., Entian K.-D., Floeth M., Goffeau A., Hebling U., Heumann K., Heuss-Neitzel D., Hilbert H.
    , Hilger F., Kleine K., Koetter P., Louis E.J., Messenguy F., Mewes H.-W., Miosga T., Moestl D., Mueller-Auer S., Nentwich U., Obermaier B., Piravandi E., Pohl T.M., Portetelle D., Purnelle B., Rechmann S., Rieger M., Rinke M., Rose M., Scharfe M., Scherens B., Scholler P., Schwager C., Schwarz S., Underwood A.P., Urrestarazu L.A., Vandenbol M., Verhasselt P., Vierendeels F., Voet M., Volckaert G., Voss H., Wambutt R., Wedler E., Wedler H., Zimmermann F.K., Zollner A., Hani J., Hoheisel J.D.
    Nature 387:87-90(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiYL66C_YEAST
AccessioniPrimary (citable) accession number: P0CL38
Secondary accession number(s): Q8TF92, Q8TGK3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 1, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Product of a dubious gene prediction. Completely overlaps YRF1-4.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome XII
    Yeast (Saccharomyces cerevisiae) chromosome XII: entries and gene names

External Data

Dasty 3