Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P0CL30 (YNL39_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative uncharacterized protein YNL339W-A
Gene names
Ordered Locus Names:YNL339W-A
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length191 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceUncertain

General annotation (Comments)

Subcellular location

Membrane; Single-pass membrane protein Potential.

Caution

Product of a dubious gene prediction. Completely overlaps YRF1-6.

Ontologies

Keywords
   Cellular componentMembrane
   DomainSignal
Transmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1717 Potential
Chain18 – 191174Putative uncharacterized protein YNL339W-A
PRO_0000406007

Regions

Transmembrane168 – 18821Helical; Potential
Compositional bias13 – 159147Gly/Ser-rich

Sequences

Sequence LengthMass (Da)Tools
P0CL30 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 7B8EC1E1D3BD97C0

FASTA19117,367
        10         20         30         40         50         60 
MESIILSIAI FIGVLLGTSV GTFSGSGISA GVGASSGSGI SAGVGASSGS STSVGVGTFG 

        70         80         90        100        110        120 
GSSTSVGVGT FGGSSTSVGV GTFSGSRTSP DVDAGSGSST SPDVGAGSGS SISAGVGTFS 

       130        140        150        160        170        180 
GSRTSPDVDA GSGSSTSPDV GAGSGSSISA GVGSRIGTGI STTMNARVAV LITAAILSAP 

       190 
VTAIALLEAR R 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications."
Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J. expand/collapse author list , Bussereau F., Coster F., Crouzet M., D'Angelo M., Dal Pero F., De Antoni A., del Rey F., Doignon F., Domdey H., Dubois E., Fiedler T.A., Fleig U., Floeth M., Fritz C., Gaillardin C., Garcia-Cantalejo J.M., Glansdorff N., Goffeau A., Gueldener U., Herbert C.J., Heumann K., Heuss-Neitzel D., Hilbert H., Hinni K., Iraqui Houssaini I., Jacquet M., Jimenez A., Jonniaux J.-L., Karpfinger-Hartl L., Lanfranchi G., Lepingle A., Levesque H., Lyck R., Maftahi M., Mallet L., Maurer C.T.C., Messenguy F., Mewes H.-W., Moestl D., Nasr F., Nicaud J.-M., Niedenthal R.K., Pandolfo D., Pierard A., Piravandi E., Planta R.J., Pohl T.M., Purnelle B., Rebischung C., Remacha M.A., Revuelta J.L., Rinke M., Saiz J.E., Sartorello F., Scherens B., Sen-Gupta M., Soler-Mira A., Urbanus J.H.M., Valle G., Van Dyck L., Verhasselt P., Vierendeels F., Vissers S., Voet M., Volckaert G., Wach A., Wambutt R., Wedler H., Zollner A., Hani J.
Nature 387:93-98(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (YNL339W-A).
Strain: ATCC 204508 / S288c.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"An integrated approach for finding overlooked genes in yeast."
Kumar A., Harrison P.M., Cheung K.-H., Lan N., Echols N., Bertone P., Miller P., Gerstein M.B., Snyder M.
Nat. Biotechnol. 20:58-63(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z71614 Genomic DNA. No translation available.
Z71615 Genomic DNA. No translation available.
AF479972 Genomic DNA. Translation: AAL79285.1.
BK006947 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalP0CL30.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYER190C-A; YER190C-A; YER190C-A.
YGR296C-A; YGR296C-A; YGR296C-A.
YML133W-A; YML133W-A; YML133W-A.
YNL339W-A; YNL339W-A; YNL339W-A.
YPL283W-A; YPL283W-A; YPL283W-A.

Organism-specific databases

SGDS000028703. YNL339W-A.

Phylogenomic databases

OrthoDBEOG77M928.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameYNL39_YEAST
AccessionPrimary (citable) accession number: P0CL30
Secondary accession number(s): Q8TFA6
Entry history
Integrated into UniProtKB/Swiss-Prot: March 8, 2011
Last sequence update: March 8, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome XIV

Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD