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P0CH64

- DDI3_YEAST

UniProt

P0CH64 - DDI3_YEAST

Protein

DNA damage-inducible protein 3

Gene

DDI3

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. lyase activity Source: UniProtKB-KW
    2. metal ion binding Source: InterPro
    3. phosphoric diester hydrolase activity Source: InterPro

    Keywords - Molecular functioni

    Lyase

    Enzyme and pathway databases

    BioCyciYEAST:G3O-33318-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA damage-inducible protein 3
    Gene namesi
    Name:DDI3
    Ordered Locus Names:YNL335W
    ORF Names:N0280
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome XIV

    Organism-specific databases

    SGDiS000005279. DDI3.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 225225DNA damage-inducible protein 3PRO_0000397875Add
    BLAST

    Expressioni

    Inductioni

    By DNA damage.1 Publication

    Interactioni

    Protein-protein interaction databases

    BioGridi35506. 2 interactions.
    MINTiMINT-405992.

    Structurei

    3D structure databases

    ProteinModelPortaliP0CH64.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000012527.
    OrthoDBiEOG7CRV1M.

    Family and domain databases

    Gene3Di1.10.3210.10. 1 hit.
    InterProiIPR017771. Cyanamide_hydratase_HD.
    IPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    [Graphical view]
    PfamiPF01966. HD. 1 hit.
    [Graphical view]
    SMARTiSM00471. HDc. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR03401. cyanamide_fam. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P0CH64-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSQYGFVRVP REVEKAIPVV NAPRPRAVVP PPNSETARLV REYAAKELTA    50
    PVLNHSLRVF QYSVAIIRDQ FPAWDLDQEV LYVTCLLHDI ATTDKNMRAT 100
    KMSFEYYGGI LSRELVFNAT GGNQDYADAV TEAIIRHQDL TGTGYITTLG 150
    LILQIATTLD NVGSNTDLIH IDTVSAINEQ FPRLHWLSCF ATVVDTENSR 200
    KPWGHTSSLG DDFSKKVICN TFGYN 225
    Length:225
    Mass (Da):25,152
    Last modified:October 5, 2010 - v1
    Checksum:iF4890BF675E652B2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z71611 Genomic DNA. Translation: CAA96269.1.
    AY692690 Genomic DNA. Translation: AAT92709.1.
    BK006947 Genomic DNA. Translation: DAA10228.1.
    PIRiS56194.
    RefSeqiNP_014064.1. NM_001183173.1.
    NP_116594.1. NM_001179906.1.

    Genome annotation databases

    EnsemblFungiiYFL061W; YFL061W; YFL061W.
    YNL335W; YNL335W; YNL335W.
    GeneIDi850483.
    855381.
    KEGGisce:YFL061W.
    sce:YNL335W.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z71611 Genomic DNA. Translation: CAA96269.1 .
    AY692690 Genomic DNA. Translation: AAT92709.1 .
    BK006947 Genomic DNA. Translation: DAA10228.1 .
    PIRi S56194.
    RefSeqi NP_014064.1. NM_001183173.1.
    NP_116594.1. NM_001179906.1.

    3D structure databases

    ProteinModelPortali P0CH64.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 35506. 2 interactions.
    MINTi MINT-405992.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YFL061W ; YFL061W ; YFL061W .
    YNL335W ; YNL335W ; YNL335W .
    GeneIDi 850483.
    855381.
    KEGGi sce:YFL061W.
    sce:YNL335W.

    Organism-specific databases

    SGDi S000005279. DDI3.

    Phylogenomic databases

    GeneTreei ENSGT00390000012527.
    OrthoDBi EOG7CRV1M.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-33318-MONOMER.

    Miscellaneous databases

    NextBioi 966143.

    Family and domain databases

    Gene3Di 1.10.3210.10. 1 hit.
    InterProi IPR017771. Cyanamide_hydratase_HD.
    IPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    [Graphical view ]
    Pfami PF01966. HD. 1 hit.
    [Graphical view ]
    SMARTi SM00471. HDc. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR03401. cyanamide_fam. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications."
      Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J.
      , Bussereau F., Coster F., Crouzet M., D'Angelo M., Dal Pero F., De Antoni A., del Rey F., Doignon F., Domdey H., Dubois E., Fiedler T.A., Fleig U., Floeth M., Fritz C., Gaillardin C., Garcia-Cantalejo J.M., Glansdorff N., Goffeau A., Gueldener U., Herbert C.J., Heumann K., Heuss-Neitzel D., Hilbert H., Hinni K., Iraqui Houssaini I., Jacquet M., Jimenez A., Jonniaux J.-L., Karpfinger-Hartl L., Lanfranchi G., Lepingle A., Levesque H., Lyck R., Maftahi M., Mallet L., Maurer C.T.C., Messenguy F., Mewes H.-W., Moestl D., Nasr F., Nicaud J.-M., Niedenthal R.K., Pandolfo D., Pierard A., Piravandi E., Planta R.J., Pohl T.M., Purnelle B., Rebischung C., Remacha M.A., Revuelta J.L., Rinke M., Saiz J.E., Sartorello F., Scherens B., Sen-Gupta M., Soler-Mira A., Urbanus J.H.M., Valle G., Van Dyck L., Verhasselt P., Vierendeels F., Vissers S., Voet M., Volckaert G., Wach A., Wambutt R., Wedler H., Zollner A., Hani J.
      Nature 387:93-98(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    2. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    4. "Rad6-Rad18 mediates a eukaryotic SOS response by ubiquitinating the 9-1-1 checkpoint clamp."
      Fu Y., Zhu Y., Zhang K., Yeung M., Durocher D., Xiao W.
      Cell 133:601-611(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: INDUCTION.

    Entry informationi

    Entry nameiDDI3_YEAST
    AccessioniPrimary (citable) accession number: P0CH64
    Secondary accession number(s): D6VTG9, P43543
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome XIV
      Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names

    External Data

    Dasty 3