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Protein

Transposase InsF for insertion sequence IS3A

Gene

insF1

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the transposition of the insertion sequence IS3.

GO - Molecular functioni

GO - Biological processi

  • DNA integration Source: InterPro
  • DNA recombination Source: UniProtKB-KW
  • transposition Source: EcoCyc
Complete GO annotation...

Keywords - Biological processi

DNA recombination, Transposition

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:G7126-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Transposase InsF for insertion sequence IS3A
Gene namesi
Name:insF1
Ordered Locus Names:b0299, JW0293
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG40006. insF1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 288288Transposase InsF for insertion sequence IS3APRO_0000075415Add
BLAST

Proteomic databases

PaxDbiP0CF79.

Interactioni

Protein-protein interaction databases

STRINGi511145.b2089.

Structurei

3D structure databases

ProteinModelPortaliP0CF79.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini124 – 287164Integrase catalyticPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the transposase IS3/IS150/IS904 family.Curated
Contains 1 integrase catalytic domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG2801. LUCA.
InParanoidiP0CF79.
PhylomeDBiP0CF79.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR025948. HTH-like_dom.
IPR001584. Integrase_cat-core.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF13276. HTH_21. 1 hit.
PF00665. rve. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0CF79-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYVFIEKHQ AEFSIKAMCR VLRVARSGWY TWCQRRTRIS TRQQFRQHCD
60 70 80 90 100
SVVLAAFTRS KQRYGAPRLT DELRAQGYPF NVKTVAASLR RQGLRAKASR
110 120 130 140 150
KFSPVSYRAH GLPVSENLLE QDFYASGPNQ KWAGDITYLR TDEGWLYLAV
160 170 180 190 200
VIDLWSRAVI GWSMSPRMTA QLACDALQMA LWRRKRPRNV IVHTDRGGQY
210 220 230 240 250
CSADYQAQLK RHNLRGSMSA KGCCYDNACV ESFFHSLKVE CIHGEHFISR
260 270 280
EIMRATVFNY IECDYNRWRR HSWCGGLSPE QFENKNLA
Length:288
Mass (Da):33,540
Last modified:May 18, 2010 - v1
Checksum:i9237EA662E021EB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X02311 Genomic DNA. Translation: CAB37974.1.
U73857 Genomic DNA. Translation: AAB18027.1.
U00096 Genomic DNA. Translation: AAC73402.1.
AP009048 Genomic DNA. Translation: BAE76084.1.
PIRiC64756. TQECI3.
RefSeqiNP_061381.1. NC_002483.1.
NP_414833.1. NC_000913.3.
NP_414906.1. NC_000913.3.
NP_415073.1. NC_000913.3.
NP_415545.1. NC_000913.3.
NP_416593.1. NC_000913.3.
WP_000878218.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73402; AAC73402; b0299.
BAE76084; BAE76084; BAE76084.
GeneIDi1263587.
944948.
945036.
945587.
946629.
947988.
KEGGiecj:JW0293.
eco:b0299.
eco:b0372.
eco:b0541.
eco:b1026.
eco:b2089.
pg:1263587.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X02311 Genomic DNA. Translation: CAB37974.1.
U73857 Genomic DNA. Translation: AAB18027.1.
U00096 Genomic DNA. Translation: AAC73402.1.
AP009048 Genomic DNA. Translation: BAE76084.1.
PIRiC64756. TQECI3.
RefSeqiNP_061381.1. NC_002483.1.
NP_414833.1. NC_000913.3.
NP_414906.1. NC_000913.3.
NP_415073.1. NC_000913.3.
NP_415545.1. NC_000913.3.
NP_416593.1. NC_000913.3.
WP_000878218.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0CF79.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b2089.

Proteomic databases

PaxDbiP0CF79.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73402; AAC73402; b0299.
BAE76084; BAE76084; BAE76084.
GeneIDi1263587.
944948.
945036.
945587.
946629.
947988.
KEGGiecj:JW0293.
eco:b0299.
eco:b0372.
eco:b0541.
eco:b1026.
eco:b2089.
pg:1263587.

Organism-specific databases

EchoBASEiEB4710.
EcoGeneiEG40006. insF1.

Phylogenomic databases

eggNOGiCOG2801. LUCA.
InParanoidiP0CF79.
PhylomeDBiP0CF79.

Enzyme and pathway databases

BioCyciEcoCyc:G7126-MONOMER.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR025948. HTH-like_dom.
IPR001584. Integrase_cat-core.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF13276. HTH_21. 1 hit.
PF00665. rve. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiINSF1_ECOLI
AccessioniPrimary (citable) accession number: P0CF79
Secondary accession number(s): O08009
, O08012, O08304, P05822, P77673, Q2MBI8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 18, 2010
Last sequence update: May 18, 2010
Last modified: September 7, 2016
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome, Transposable element

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.