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Protein

Transposase InsD for insertion element IS2A

Gene

insD1

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the transposition of the insertion sequence IS2.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

DNA recombination, Transposition

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:G7480-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Transposase InsD for insertion element IS2A
Gene namesi
Name:insD1
Ordered Locus Names:b0361, JW0352
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG40004. insD1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 301301Transposase InsD for insertion element IS2APRO_0000075411Add
BLAST

Proteomic databases

PaxDbiP0CF53.
PRIDEiP0CF53.

Interactioni

Protein-protein interaction databases

STRINGi511145.b4273.

Structurei

3D structure databases

ProteinModelPortaliP0CF53.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini106 – 289184Integrase catalyticPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 integrase catalytic domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4108MVM. Bacteria.
ENOG410Z4Y8. LUCA.
InParanoidiP0CF53.
KOiK07497.
OMAiARSNQRW.
OrthoDBiEOG6CGCC4.
PhylomeDBiP0CF53.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR025948. HTH-like_dom.
IPR001584. Integrase_cat-core.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF13276. HTH_21. 1 hit.
PF00665. rve. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0CF53-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSARALIAR GWGVSLVSRC LRVSRAQLHV ILRRTDDWMD GRRSRHTDDT
60 70 80 90 100
DVLLRIHHVI GELPTYGYRR VWALLRRQAE LDGMPAINAK RVYRIMRQNA
110 120 130 140 150
LLLERKPAVP PSKRAHTGRV AVKESNQRWC SDGFEFCCDN GERLRVTFAL
160 170 180 190 200
DCCDREALHW AVTTGGFNSE TVQDVMLGAV ERRFGNDLPS SPVEWLTDNG
210 220 230 240 250
SCYRANETRQ FARMLGLEPK NTAVRSPESN GIAESFVKTI KRDYISIMPK
260 270 280 290 300
PDGLTAAKNL AEAFEHYNEW HPHSALGYRS PREYLRQRAC NGLSDNRCLE

I
Length:301
Mass (Da):34,398
Last modified:April 20, 2010 - v1
Checksum:i9D6E3EB8FA7E2BA5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73857 Genomic DNA. Translation: AAB18085.1.
U00096 Genomic DNA. Translation: AAC73464.1.
AP009048 Genomic DNA. Translation: BAE76142.1.
PIRiA64764. C65092.
RefSeqiNP_061399.1. NC_002483.1.
NP_414895.1. NC_000913.3.
NP_415920.1. NC_000913.3.
NP_416500.1. NC_000913.3.
NP_417337.1. NC_000913.3.
NP_417517.1. NC_000913.3.
NP_418693.1. NC_000913.3.
WP_000376502.1. NZ_LN832404.1.
YP_424823.1. NC_007635.1.

Genome annotation databases

EnsemblBacteriaiAAC73464; AAC73464; b0361.
BAE76142; BAE76142; BAE76142.
GeneIDi1263540.
3829341.
945203.
945952.
946403.
947346.
947517.
948779.
KEGGiecj:JW0352.
eco:b0361.
eco:b1402.
eco:b1996.
eco:b2860.
eco:b3045.
eco:b4273.
pg:1263540.
pg:3829341.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73857 Genomic DNA. Translation: AAB18085.1.
U00096 Genomic DNA. Translation: AAC73464.1.
AP009048 Genomic DNA. Translation: BAE76142.1.
PIRiA64764. C65092.
RefSeqiNP_061399.1. NC_002483.1.
NP_414895.1. NC_000913.3.
NP_415920.1. NC_000913.3.
NP_416500.1. NC_000913.3.
NP_417337.1. NC_000913.3.
NP_417517.1. NC_000913.3.
NP_418693.1. NC_000913.3.
WP_000376502.1. NZ_LN832404.1.
YP_424823.1. NC_007635.1.

3D structure databases

ProteinModelPortaliP0CF53.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b4273.

Proteomic databases

PaxDbiP0CF53.
PRIDEiP0CF53.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73464; AAC73464; b0361.
BAE76142; BAE76142; BAE76142.
GeneIDi1263540.
3829341.
945203.
945952.
946403.
947346.
947517.
948779.
KEGGiecj:JW0352.
eco:b0361.
eco:b1402.
eco:b1996.
eco:b2860.
eco:b3045.
eco:b4273.
pg:1263540.
pg:3829341.

Organism-specific databases

EchoBASEiEB4752.
EcoGeneiEG40004. insD1.

Phylogenomic databases

eggNOGiENOG4108MVM. Bacteria.
ENOG410Z4Y8. LUCA.
InParanoidiP0CF53.
KOiK07497.
OMAiARSNQRW.
OrthoDBiEOG6CGCC4.
PhylomeDBiP0CF53.

Enzyme and pathway databases

BioCyciEcoCyc:G7480-MONOMER.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR025948. HTH-like_dom.
IPR001584. Integrase_cat-core.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF13276. HTH_21. 1 hit.
PF00665. rve. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence of minutes 4-25 of Escherichia coli."
    Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiINSD1_ECOLI
AccessioniPrimary (citable) accession number: P0CF53
Secondary accession number(s): P0C5W4
, P19777, P76167, P76916, P77033, Q79EJ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 11, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome, Transposable element

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.