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P0CF45 (INSC6_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transposase InsC for insertion element IS2K
Gene names
Name:insC6
Ordered Locus Names:b4272, JW4229
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia ›

Protein attributes

Sequence length121 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in the transposition of the insertion sequence IS2.

Sequence similarities

Belongs to the transposase 8 family.

Sequence caution

The sequence AAA97168.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

The sequence BAE78268.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Ontologies

Keywords
   Biological processDNA recombination
Transposition
   LigandDNA-binding
   Technical termComplete proteome
Reference proteome
Transposable element
Gene Ontology (GO)
   Biological_processtransposition, DNA-mediated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

transposase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 121121Transposase InsC for insertion element IS2K
PRO_0000393453

Sequences

Sequence LengthMass (Da)Tools
P0CF45 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 59431E5C452E067A

FASTA12113,452
        10         20         30         40         50         60 
MIDVLGPEKR RRRTTQEKIA IVQQSFEPGM TVSLVARQHG VAASQLFLWR KQYQEGSLTA 

        70         80         90        100        110        120 
VAAGEQVVPA SELAAAMKQI KELQRLLGKK TMENELLKEA VEYGRAKKWI AHAPLLPGDG 


E

« Hide

References

[1]"Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U14003 Genomic DNA. Translation: AAA97168.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77228.2.
AP009048 Genomic DNA. Translation: BAE78268.1. Different initiation.
PIRB65240.
RefSeqNP_414894.2. NC_000913.2.
NP_415921.2. NC_000913.2.
NP_417338.3. NC_000913.2.
NP_417516.3. NC_000913.2.
NP_418692.2. NC_000913.2.
YP_026163.2. NC_000913.2.
YP_488653.1. NC_007779.1.
YP_489671.1. NC_007779.1.
YP_490239.1. NC_007779.1.
YP_491064.1. NC_007779.1.
YP_491236.1. NC_007779.1.
YP_492409.1. NC_007779.1.

3D structure databases

ProteinModelPortalP0CF45.
SMRP0CF45. Positions 6-54.
ModBaseSearch...

Proteomic databases

PRIDEP0CF45.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC77228; AAC77228; b4272.
BAE78268; BAE78268; BAE78268.
GeneID12930546.
12932814.
12932905.
12933321.
12933739.
12934023.
945025.
945967.
946455.
947347.
947520.
948781.
KEGGecj:Y75_p0349.
ecj:Y75_p1380.
ecj:Y75_p1958.
ecj:Y75_p2795.
ecj:Y75_p2970.
ecj:Y75_p4154.
eco:b0360.
eco:b1403.
eco:b1997.
eco:b2861.
eco:b3044.
eco:b4272.

Organism-specific databases

EchoBASEEB4711.
EcoGeneEG40003. insC6.

Enzyme and pathway databases

BioCycEcoCyc:MONOMER0-4254.

Family and domain databases

Gene3D1.10.10.60. 1 hit.
InterProIPR009057. Homeodomain-like.
IPR002514. Transposase_8.
[Graphical view]
PfamPF01527. HTH_Tnp_1. 1 hit.
[Graphical view]
SUPFAMSSF46689. Homeodomain_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameINSC6_ECOLI
AccessionPrimary (citable) accession number: P0CF45
Secondary accession number(s): O07989 expand/collapse secondary AC list , O08018, O08019, P0C5W2, P19776, P76357, P77346, Q2MBI5, Q2MC65, Q79BJ2, Q9JMT0
Entry history
Integrated into UniProtKB/Swiss-Prot: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene

SIMILARITY comments

Index of protein domains and families

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