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Protein

30S ribosomal protein S17

Gene

rpsQ

Organism
Chlamydia trachomatis (strain D/UW-3/Cx)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S17UniRule annotation
Gene namesi
Name:rpsQUniRule annotation
Synonyms:rs17
Ordered Locus Names:CT_519
OrganismiChlamydia trachomatis (strain D/UW-3/Cx)
Taxonomic identifieri272561 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
Proteomesi
  • UP000000431 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001284551 – 8330S ribosomal protein S17Add BLAST83

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi272561.CT519.

Structurei

3D structure databases

ProteinModelPortaliP0CE05.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S17P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG41084D8. Bacteria.
COG0186. LUCA.
InParanoidiP0CE05.
KOiK02961.
OMAiVEDHDYP.

Family and domain databases

HAMAPiMF_01345_B. Ribosomal_S17_B. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR000266. Ribosomal_S17/S11.
IPR019984. Ribosomal_S17_bac-type.
IPR019979. Ribosomal_S17_CS.
[Graphical view]
PANTHERiPTHR10744. PTHR10744. 1 hit.
PfamiPF00366. Ribosomal_S17. 1 hit.
[Graphical view]
PRINTSiPR00973. RIBOSOMALS17.
ProDomiPD001295. Ribosomal_S17. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR03635. uS17_bact. 1 hit.
PROSITEiPS00056. RIBOSOMAL_S17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0CE05-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASDVRGRRK TKIGVVVSSK MEKTVVVRVE RVYSHPQYAK VVRDSSKYYA
60 70 80
HNELDVKEGD TVRIQETRPL SKTKRWRVVG RVN
Length:83
Mass (Da):9,645
Last modified:March 2, 2010 - v1
Checksum:i446CB5FDB4418FD2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001273 Genomic DNA. Translation: AAC68120.1.
PIRiC42645.
RefSeqiNP_220034.1. NC_000117.1.
WP_009871883.1. NC_000117.1.

Genome annotation databases

EnsemblBacteriaiAAC68120; AAC68120; CT_519.
GeneIDi884306.
KEGGictr:CT_519.
PATRICi20380631. VBIChlTra43535_0563.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001273 Genomic DNA. Translation: AAC68120.1.
PIRiC42645.
RefSeqiNP_220034.1. NC_000117.1.
WP_009871883.1. NC_000117.1.

3D structure databases

ProteinModelPortaliP0CE05.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272561.CT519.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC68120; AAC68120; CT_519.
GeneIDi884306.
KEGGictr:CT_519.
PATRICi20380631. VBIChlTra43535_0563.

Phylogenomic databases

eggNOGiENOG41084D8. Bacteria.
COG0186. LUCA.
InParanoidiP0CE05.
KOiK02961.
OMAiVEDHDYP.

Family and domain databases

HAMAPiMF_01345_B. Ribosomal_S17_B. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR000266. Ribosomal_S17/S11.
IPR019984. Ribosomal_S17_bac-type.
IPR019979. Ribosomal_S17_CS.
[Graphical view]
PANTHERiPTHR10744. PTHR10744. 1 hit.
PfamiPF00366. Ribosomal_S17. 1 hit.
[Graphical view]
PRINTSiPR00973. RIBOSOMALS17.
ProDomiPD001295. Ribosomal_S17. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR03635. uS17_bact. 1 hit.
PROSITEiPS00056. RIBOSOMAL_S17. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS17_CHLTR
AccessioniPrimary (citable) accession number: P0CE05
Secondary accession number(s): P28545
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 5, 2016
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.