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Protein

30S ribosomal protein S17

Gene

rpsQ

Organism
Chlamydia trachomatis (strain D/UW-3/Cx)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S17UniRule annotation
Gene namesi
Name:rpsQUniRule annotation
Synonyms:rs17
Ordered Locus Names:CT_519
OrganismiChlamydia trachomatis (strain D/UW-3/Cx)
Taxonomic identifieri272561 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
Proteomesi
  • UP000000431 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001284551 – 8330S ribosomal protein S17Add BLAST83

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliP0CE05.
SMRiP0CE05.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS17 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG41084D8. Bacteria.
COG0186. LUCA.
InParanoidiP0CE05.
KOiK02961.
OMAiHPMYGKF.

Family and domain databases

HAMAPiMF_01345_B. Ribosomal_S17_B. 1 hit.
InterProiView protein in InterPro
IPR012340. NA-bd_OB-fold.
IPR019984. Ribosomal_S17.
IPR000266. Ribosomal_S17/S11.
IPR019979. Ribosomal_S17_CS.
PANTHERiPTHR10744. PTHR10744. 1 hit.
PfamiView protein in Pfam
PF00366. Ribosomal_S17. 1 hit.
PRINTSiPR00973. RIBOSOMALS17.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001295. Ribosomal_S17. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR03635. uS17_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00056. RIBOSOMAL_S17. 1 hit.

Sequencei

Sequence statusi: Complete.

P0CE05-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASDVRGRRK TKIGVVVSSK MEKTVVVRVE RVYSHPQYAK VVRDSSKYYA
60 70 80
HNELDVKEGD TVRIQETRPL SKTKRWRVVG RVN
Length:83
Mass (Da):9,645
Last modified:March 2, 2010 - v1
Checksum:i446CB5FDB4418FD2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001273 Genomic DNA. Translation: AAC68120.1.
PIRiC42645.
RefSeqiNP_220034.1. NC_000117.1.
WP_009871883.1. NC_000117.1.

Genome annotation databases

EnsemblBacteriaiAAC68120; AAC68120; CT_519.
GeneIDi31550496.
884306.
KEGGictr:CT_519.
PATRICifig|272561.5.peg.563.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS17_CHLTR
AccessioniPrimary (citable) accession number: P0CE05
Secondary accession number(s): P28545
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 2, 2010
Last sequence update: March 2, 2010
Last modified: July 5, 2017
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families