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Protein

Putative uncharacterized protein YmjD

Gene

ymjD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2872.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YmjD
Gene namesi
Name:ymjD
Ordered Locus Names:b4673, JW5960.1
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14478. ymjD.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003916761 – 21Putative uncharacterized protein YmjDAdd BLAST21

Expressioni

Inductioni

In stationary phase (at protein level).1 Publication

Sequencei

Sequence statusi: Complete.

P0CD93-1 [UniParc]FASTAAdd to basket

« Hide

        10         20 
MKHIQIRNSD MDWHIAANNL G
Length:21
Mass (Da):2,465
Last modified:March 2, 2010 - v1
Checksum:iA5D1FBA4CBFF5191
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EcoGeneiEG14478. ymjD.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2872.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYMJD_ECOLI
AccessioniPrimary (citable) accession number: P0CD93
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 2, 2010
Last sequence update: March 2, 2010
Last modified: November 2, 2016
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene. This seems to be a remnant of a longer hydrolase gene that can be found in some other Escherichia and Shigella strains.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.