P0CB62 (YMIA_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein ymiA

Gene names

Name:	ymiA
Ordered Locus Names:	b4522, JW1267.1

Organism

Escherichia coli (strain K12)

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	42 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Subcellular location	Membrane; Single-pass membrane protein Potential Ref.3.
Induction	Constitutively expressed (at protein level). Ref.3

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 42	42	Uncharacterized protein ymiA		PRO_0000388331
Regions
	Transmembrane	18 – 38	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	P0CB62 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: 072678B23616655C	FASTA	42	4,866
	10 20 30 40 MPSGNQEPRR DPELKRKAWL AVFLGSALFW VVVALLIWKV WG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]	"Small membrane proteins found by comparative genomics and ribosome binding site models." Hemm M.R., Paul B.J., Schneider T.D., Storz G., Rudd K.E. Mol. Microbiol. 70:1487-1501(2008) [PubMed: 19121005] [Abstract] Cited for: SUBCELLULAR LOCATION, INDUCTION. Strain: K12 / MG1655 / ATCC 47076.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00096 Genomic DNA. Translation: ABD18655.1. AP009048 Genomic DNA. No translation available.
RefSeq	YP_588449.1. NC_000913.2.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000005200; EBESCP00000141854; EBESCG00000004265. EBESCT00000151757; EBESCP00000141884; EBESCG00000150808.
GeneID	1450256.
GenomeReviews	Gene locus b4522 in contig AP009048_GR. Gene locus b4522 in contig U00096_GR.
KEGG	eco:b4522.
PATRIC	32117810. VBIEscCol129921_1325.
Organism-specific databases
EcoGene	EG14463. ymiA.
Phylogenomic databases
GeneTree	EBGT00050000010998.
ProtClustDB	CLSK880130.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

YMIA_ECOLI

Accession

Primary (citable) accession number: P0CB62

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	January 25, 2012
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program