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Protein

Putative poly(A) polymerase catalytic subunit

Gene

Pret-079

Organism
African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) (ASFV)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Polymerase that creates the 3'-poly(A) tail of mRNA's.Curated

Catalytic activityi

ATP + RNA(n) = diphosphate + RNA(n+1).

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Biological processi

mRNA processing, Transcription

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative poly(A) polymerase catalytic subunit (EC:2.7.7.19)
Gene namesi
Ordered Locus Names:Pret-079
OrganismiAfrican swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) (ASFV)
Taxonomic identifieri561443 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageAsfarviridaeAsfivirus
Virus hostiOrnithodoros (relapsing fever ticks) [TaxID: 6937]
Phacochoerus aethiopicus (Warthog) [TaxID: 85517]
Phacochoerus africanus (Warthog) [TaxID: 41426]
Potamochoerus larvatus (Bushpig) [TaxID: 273792]
Sus scrofa (Pig) [TaxID: 9823]
ProteomesiUP000000859 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 475475Putative poly(A) polymerase catalytic subunitPRO_0000373149Add
BLAST

Family & Domainsi

Sequence similaritiesi

Sequencei

Sequence statusi: Complete.

P0C9D3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSLLKTDFN VSKYRLIAQK REANAVEIEA ALEVVREFII KKKLILYGGI
60 70 80 90 100
AIDYALHLKG SSIYPEGERP DFDMFSPNHV EDAYELADIL YEKGFKQVGT
110 120 130 140 150
VRAIHVQTMR VRTDFVWVAD LSYMPPNIFD TIPTLTYKNL KIIHPDYQRA
160 170 180 190 200
GLHLAFCFPF DNPPREDVFS RFKKDLQRYN LIEKYYPIPV VPVKSTYESK
210 220 230 240 250
TFSIPFKQVA IHGFAAYALL YQTLNELRIT CKVPEWKTEF PQPSYSYHKN
260 270 280 290 300
DKNITLTVDM PRAYPALVLA TYNPEGVIKE MGLHLTEICE PYMDYSPPIF
310 320 330 340 350
KTNDIHFFST MFKELAISII QDNLIVVSPQ YLLLYFLYGA FATPADKSLF
360 370 380 390 400
LFYYNATLWI LEKADSLLNI IQKQTSPEEF TRFANTSPFV LTTRVLSCSQ
410 420 430 440 450
ERCTFSPAYR ISLANDVQQS QLPLPKTHFL SNSLPDISTL PYNYYPGKGK
460 470
EKPTNFNYEK NLLFNIGGKC TPSAM
Length:475
Mass (Da):54,736
Last modified:May 5, 2009 - v1
Checksum:i549043CF8995E2CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY261363 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY261363 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "African swine fever virus genomes."
    Kutish G.F., Rock D.L.
    Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiPAP1_ASFP4
AccessioniPrimary (citable) accession number: P0C9D3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: May 5, 2009
Last modified: January 7, 2015
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.