Reviewed,
UniProtKB/Swiss-Prot P0C7J3 (XANB_XANCP)
Last modified
February 9, 2010.
Version 19.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Xanthan biosynthesis protein xanB Including the following 2 domains: 1- Recommended name: Mannose-6-phosphate isomerase EC=5.3.1.8 Alternative name(s): Phosphomannose isomerase Short name=PMI Phosphohexomutase 2- Recommended name: Mannose-1-phosphate guanylyl transferase EC=2.7.7.13 Alternative name(s): GDP-mannose pyrophosphorylase Short name=GMPP Short name=GMP | ||||
| Gene names |
| ||||
| Organism | Xanthomonas campestris pv. campestris [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 340 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas |
Protein attributes
| Sequence length | 467 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | Involved in xanthan production By similarity. |
| Catalytic activity | D-mannose 6-phosphate = D-fructose 6-phosphate. GTP + alpha-D-mannose 1-phosphate = diphosphate + GDP-mannose. |
| Pathway | |
| Sequence similarities | Belongs to the mannose-6-phosphate isomerase type 2 family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Exopolysaccharide synthesis Lipopolysaccharide biosynthesis |
| Ligand | GTP-binding Nucleotide-binding |
| Molecular function | Isomerase Nucleotidyltransferase Transferase |
| Technical term | Complete proteome Multifunctional enzyme |
| Gene Ontology (GO) | |
| Biological process | lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | GTP binding Inferred from electronic annotation. Source: UniProtKB-KW mannose-1-phosphate guanylyltransferase activityInferred from electronic annotation. Source: EC mannose-6-phosphate isomerase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 467 | 467 | Xanthan biosynthesis protein xanB | PRO_0000194252 | |||
Sequences
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References
| [1] | "Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. Kitajima J.P.Nature 417:459-463(2002) [PubMed: 12024217] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33913 / NCPPB 528 / LMG 568. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE008922 Genomic DNA. Translation: AAM39941.1. |
| RefSeq | NP_636017.1. |
3D structure databases | |
| SMR | P0C7J3. Positions 4-269, 356-466. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1000899. |
| GenomeReviews | Gene locus XCC0625 in contig AE008922_GR. |
| KEGG | xcc:XCC0625. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG422488. |
| OMA | AEHRMVA. |
Family and domain databases | |
| InterPro | IPR011051. Cupin_RmlC_type. IPR006375. Man1P_GuaTrfase/Man6P_Isoase. IPR001538. Man6P_isomerase-2_C. IPR005835. NTP_transferase. IPR014710. RmlC-like_jellyroll. [Graphical view] |
| Gene3D | G3DSA:2.60.120.10. RmlC-like_jellyroll. 1 hit. |
| Pfam | PF01050. MannoseP_isomer. 1 hit. PF00483. NTP_transferase. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR01479. GMP_PMI. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | XANB_XANCP | ||||||||
| Accession | Primary (citable) accession number: P0C7J3 Secondary accession number(s): P29956, Q93S98 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


