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Protein

Double gene block protein 1

Gene

ORF2

Organism
Carnation mottle virus (isolate China/Shanghai) (CarMV)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Cell-to-cell movement. Displays RNA-binding activity.

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW

GO - Biological processi

  1. transmission of virus Source: InterPro
  2. transport of virus in host, cell to cell Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Viral movement protein

Keywords - Biological processi

Transport

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Double gene block protein 1
Short name:
DGBp1
Alternative name(s):
Movement protein P7
Gene namesi
ORF Names:ORF2
OrganismiCarnation mottle virus (isolate China/Shanghai) (CarMV)
Taxonomic identifieri652111 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageTombusviridaeCarmovirus
Virus hostiDianthus barbatus [TaxID: 278075]
Dianthus caryophyllus (Carnation) (Clove pink) [TaxID: 3570]
Dianthus chinensis [TaxID: 118431]
Dianthus superbus [TaxID: 288950]
Saponaria officinalis (Common soapwort) (Lychnis saponaria) [TaxID: 3572]
ProteomesiUP000006709: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6161Double gene block protein 1PRO_0000398305Add
BLAST

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni17 – 3519RNA-bindingAdd
BLAST

Sequence similaritiesi

Family and domain databases

InterProiIPR007982. Tombusvirus_movement.
[Graphical view]
PfamiPF05318. Tombus_movement. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0C777-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDIEPEVPVV EKQMLAGNRG KQKTRRSVAK DAIRKPASDS TNGGNWVNVA
60
DKIEVHIHFN F
Length:61
Mass (Da):6,831
Last modified:October 5, 2010 - v1
Checksum:i099543903B27C828
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF192772 Genomic RNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF192772 Genomic RNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR007982. Tombusvirus_movement.
[Graphical view]
PfamiPF05318. Tombus_movement. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Infectivity of full-length cDNA of carnation mottle virus."
    Zhang A.P., Yue Y., Ye R., Zhu H.Q., Xu L., Yu S.Q.
    Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  2. "Transient structural ordering of the RNA-binding domain of carnation mottle virus p7 movement protein modulates nucleic acid binding."
    Vilar M., Sauri A., Marcos J.F., Mingarro I., Perez-Paya E.
    ChemBioChem 6:1391-1396(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: RNA-BINDING.

Entry informationi

Entry nameiMP1_CARMS
AccessioniPrimary (citable) accession number: P0C777
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 5, 2010
Last sequence update: October 5, 2010
Last modified: January 7, 2015
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.