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P0C713 (NSP6_ROTH3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Non-structural protein 6

Short name=NSP6
OrganismRotavirus A (strain Human/Japan/AU-1/1982 G3-P3[9]-I3-R3-C3-M3-A3-N3-T3-E3-H3) (RV-A) [Complete proteome]
Taxonomic identifier39013 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusRotavirus A
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length74 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subunit structure

Interacts with NSP5 By similarity.

Subcellular location

Host cytoplasm. Note: Found in spherical cytoplasmic structures, called virus factories, that appear early after infection and are the site of viral replication and packaging By similarity.

Sequence similarities

Belongs to the rotavirus A NSP6 family.

Ontologies

Keywords
   Cellular componentHost cytoplasm
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componenthost cell cytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 7474Non-structural protein 6
PRO_0000369518

Sequences

Sequence LengthMass (Da)Tools
P0C713 [UniParc].

Last modified April 14, 2009. Version 1.
Checksum: 5AE7E36030B08D82

FASTA748,839
        10         20         30         40         50         60 
MNHLQQRQLF LENLLVGVNN TFHQMQKRSV STCCQSLQKI LDHLILLQTI HSPVFRLDRM 

        70 
QLRQMQTLAC LWIH 

« Hide

References

[1]"Serological and genomic characterization of human rotaviruses detected in China."
Wu H., Taniguchi K., Urasawa T., Urasawa S.
J. Med. Virol. 55:168-176(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB008656 mRNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR006950. Rotavirus_NSP6.
[Graphical view]
PfamPF04866. Rota_NS6. 1 hit.
[Graphical view]
ProDomPD008065. Rota_NS6. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Entry information

Entry nameNSP6_ROTH3
AccessionPrimary (citable) accession number: P0C713
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 14, 2009
Last modified: April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families