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P0C712

- NSP6_ROTW3

UniProt

P0C712 - NSP6_ROTW3

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Protein

Non-structural protein 6

Gene
N/A
Organism
Rotavirus A (strain Cow/United States/WC3/1981 G6-P7[5]-I2-R2-C2-M2-A3-N2-T6-E2-H3) (RV-A) (Rotavirus (strain Wistar calf 3))
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 6
Short name:
NSP6
OrganismiRotavirus A (strain Cow/United States/WC3/1981 G6-P7[5]-I2-R2-C2-M2-A3-N2-T6-E2-H3) (RV-A) (Rotavirus (strain Wistar calf 3))
Taxonomic identifieri578828 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusRotavirus A
Virus hostiBos taurus (Bovine) [TaxID: 9913]
ProteomesiUP000007181: Genome

Subcellular locationi

Host cytoplasm
Note: Found in spherical cytoplasmic structures, called virus factories, that appear early after infection and are the site of viral replication and packaging.By similarity

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9898Non-structural protein 6PRO_0000369515Add
BLAST

Interactioni

Subunit structurei

Interacts with NSP5.By similarity

Family & Domainsi

Sequence similaritiesi

Belongs to the rotavirus A NSP6 family.Curated

Family and domain databases

InterProiIPR006950. Rotavirus_NSP6.
[Graphical view]
PfamiPF04866. Rota_NS6. 1 hit.
[Graphical view]
ProDomiPD008065. Rota_NS6. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P0C712-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNHLQQRQLF LENLLVGVNN TFHQMQKHSV NTCCQSLQKI LDHLILLQTI
60 70 80 90
HSPAFRLDRM QLRQMQTLAC LWIHQHNHGH QAMLGAIKWI SPLIKELK
Length:98
Mass (Da):11,552
Last modified:April 14, 2009 - v1
Checksum:iB55826739F6EDC8F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EF990702 Genomic RNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EF990702 Genomic RNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR006950. Rotavirus_NSP6.
[Graphical view ]
Pfami PF04866. Rota_NS6. 1 hit.
[Graphical view ]
ProDomi PD008065. Rota_NS6. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "Full genome-based classification of rotaviruses reveals a common origin between human Wa-Like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains."
    Matthijnssens J., Ciarlet M., Heiman E.M., Arijs I., Delbeke T., McDonald S.M., Palombo E.A., Iturriza-Gomara M., Maes P., Patton J.T., Rahman M., Van Ranst M.
    J. Virol. 82:3204-3219(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNSP6_ROTW3
AccessioniPrimary (citable) accession number: P0C712
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 14, 2009
Last modified: October 29, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3